| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA0379 |
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| Symbol | cafA |
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| ID | 3103406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | + |
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| Start bp | 381015 |
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| End bp | 382469 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637169598 |
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| Product | ribonuclease G |
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| Protein accession | YP_112910 |
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| Protein GI | 53802441 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACG AGATACTCAT CAACGTCACG CCGCCGGAGA CCCGTGTCGC CATCGTCGAA
AACGGGGTCG TTCAGGAGGT GTTGATCGAG CGGACCCGGC GCCGCGGTCT GGTCGGCAAC
ATTTACAAGG GCAGGGTCTG CCGGGTGCTG CCCGGCATGC AGGCGGTGTT CGTCGACATC
GGGCTGGAGC GGGCGGCCTT CCTGCACATC TCCGACCTGA GCGCGGCGGA ACGCGAGAAG
GCCGGCACCG ACAAGATCGA AGCCATCTTC AGGGAGGGCC AGGAGATCGC CGTGCAGGTC
GTCAAGGACC CCATCGGTAC CAAGGGCGCG CGTTTGAGCA CCGAGATTTC GGTGCCCTCG
GTGTACGAAG TCTACATGCC GTTTTCCAAG ACTTCGGGAG TATCGCAGCG GATCGAATGC
GAGGCCGAGA GGGCACGCTT GCGGGCCTGT GTGGAGGCAT TCCAGCGGGA GCACGGTACC
GGCGGTTTCA TCGCCCGGAC CTCGGCGGAG GGCGTGGACG AGTCCCTGCT GCGGGCGGAC
ATGTTGTTCC TGCTCAAGCT CTGGAATTCC ATCGCCCAGC GGATCAAGAC CGCGAAGGTC
AAGGTGCTGC TGCATGAGGA CCTGCCCCTG AGCATGCGCG TGCTGCGCGA TCTGCGCCGC
ACCCGGGTGG ACAAGATCCG GGTCGACTCA CGGGAAACCC ATGCGCGGCT CACCAAGTTC
GCGAGAGAGT TCGTGCCCGA GATCGCCCCG ATGATCGAGC ATTACGCCGG TGAGCGTCCG
CTGTTCGACC TCTACGGCGT GGAAGAGGAG ATCCAGAAGG CGCTGGAGCG GCGGGTGACG
CTCAAGTCCG GCGGCTATCT GATCTTCGAC CAGACCGAGG CGATGACCAC GGTCGACGTC
AACACCGGCG CCTTCGTCGG CGGGCGCAAC CTCGAGGAAA CCATCTTCAA GACCAATCTC
GAGGCGGCCC AGGCCATCGC CCGTCAGCTC CGGCTGAGGA ATCTGGGCGG CATCATCATC
ATCGACTTCA TCGACATGCG GGACGAGGAT CACAAGGCAC AGGTCCTGCA TGCCCTGAGC
CGGCACCTCG AGCGCGACCC GGCCAAGAAC ACCATCAGCG AGGTGTCGCC CCTGGGCCTG
GTGGAGATGA CCCGCAAACG CACCCGCGAG AGCCTGGAGC AGGTGCTGTG CGAGCCATGC
CCCGCCTGTG GCGGGCGCGG GGTGCTGAAG ACGGCGGAAA CGACCTGCCT GGACATCTTC
CGCGAGATCA TCCGCGAGGT GCGCCAGTAC CAGGTTCAGG AACTGCTGGT GCTGGCGTCC
AACGAGGTGG TGGAGCGGCT GCTGGACGAG GAGGCGGACA CGCTGTCCGA GCTCGAATCC
TTCATCGGTG TCCCGATCAA GTTCCGCGCC GAGTCCCAGT ACAACCAGGA ACAGTACGAT
GTCGTGATCC TTTAG
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| Protein sequence | MSDEILINVT PPETRVAIVE NGVVQEVLIE RTRRRGLVGN IYKGRVCRVL PGMQAVFVDI
GLERAAFLHI SDLSAAEREK AGTDKIEAIF REGQEIAVQV VKDPIGTKGA RLSTEISVPS
VYEVYMPFSK TSGVSQRIEC EAERARLRAC VEAFQREHGT GGFIARTSAE GVDESLLRAD
MLFLLKLWNS IAQRIKTAKV KVLLHEDLPL SMRVLRDLRR TRVDKIRVDS RETHARLTKF
AREFVPEIAP MIEHYAGERP LFDLYGVEEE IQKALERRVT LKSGGYLIFD QTEAMTTVDV
NTGAFVGGRN LEETIFKTNL EAAQAIARQL RLRNLGGIII IDFIDMRDED HKAQVLHALS
RHLERDPAKN TISEVSPLGL VEMTRKRTRE SLEQVLCEPC PACGGRGVLK TAETTCLDIF
REIIREVRQY QVQELLVLAS NEVVERLLDE EADTLSELES FIGVPIKFRA ESQYNQEQYD
VVIL
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