Gene MCA0355 details

Gene Information

• Locus tag: MCA0355
• Symbol: rpiA
• ID: 3103694
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 357582
• End bp: 358238
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637169575
• Product: ribose-5-phosphate isomerase A
• Protein accession: YP_112887
• Protein GI: 53802479
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0120] Ribose 5-phosphate isomerase
• TIGRFAM ID: [TIGR00021] ribose 5-phosphate isomerase

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.991442
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTCAAG ACGAACTCAA ACGGAAAGTC GCCGAAGCGG CATTGGATTA TGTCAAGGAC 
GTCACCATCC TGGGGGTGGG AACCGGCTCG ACCGTGAACC ATTTTATTGA TTTACTGGCC 
GATCTCAAAG GCGGGATCGA AGGTGCGGTG TCCAGCTCCC AGGCCAGCTC CGAGCGTCTG 
AAGAAGATCG GCATCCCGGT GCTCGACCTC AACGCCGCCG GCACCCTGGA TGTCTACGTG 
GACGGCGCCG ATGAAGTCAA TGCCGCCAAG CAGATGATCA AGGGCGGCGG CGCGGCCCTG 
ACCCGCGAGA AGATCGTGGC GGAGGCCAGC CGCAAGTTCG TCTGCATCGT CGATGAGACC 
AAGTGCGTCG ACGTGCTGGG CAAGTTCCCG CTGCCGGTCG AGGTGATCCC GATGGCGCGC 
AGCCTGGTCG CCCGCCGCCT GGTGGAACTG GGGGGCACGC CGGTGTGGCG GGAGAACTGC 
ATCACCGACA ATGGCAATGT GATTCTCGAC GTGCACAACC TCACCATCAC CGATCCGGTC 
GAGCTGGAAC GCCGAATCAA CGATATCCCC GGGGTGGTCT GCAACGGCGT GTTCGCACTG 
CGGCCGGCGG ACGTCGTGCT GATCGGATCG CCCAGCGGCG TGCGCACGCT CCCTTGA 

 

Protein sequence

MTQDELKRKV AEAALDYVKD VTILGVGTGS TVNHFIDLLA DLKGGIEGAV SSSQASSERL 
KKIGIPVLDL NAAGTLDVYV DGADEVNAAK QMIKGGGAAL TREKIVAEAS RKFVCIVDET 
KCVDVLGKFP LPVEVIPMAR SLVARRLVEL GGTPVWRENC ITDNGNVILD VHNLTITDPV 
ELERRINDIP GVVCNGVFAL RPADVVLIGS PSGVRTLP