Gene MCA0332 details

Gene Information

• Locus tag: MCA0332
• Symbol: hemE
• ID: 3102300
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 327389
• End bp: 328441
• Gene Length: 1053 bp
• Protein Length: 350 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637169552
• Product: uroporphyrinogen decarboxylase
• Protein accession: YP_112864
• Protein GI: 53802347
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0407] Uroporphyrinogen-III decarboxylase
• TIGRFAM ID: [TIGR01464] uroporphyrinogen decarboxylase

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0475139
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTCATT GTTTCATTCG CGCCCTGCTG CGCCAGCCGG TCGAACGGAC GCCGGTCTGG 
ATGATGCGCC AGGCGGGCCG TTACCTGCCG GAATACCGCG AGGTCCGGGA GCGGGCCGGC 
AGCTTCATGA ATCTCTGCAC CTCCCCCGAA CTCGCCTGCG AAGTGACTTT GCAGCCGCTG 
GAGCGCTACC GGCTGGATGC GGCGATCCTG TTCTCCGACA TTCTGACCGT ACCTGACGCC 
ATGGGGCTGG GTCTGGAATT CGTCGAGGGC GAGGGACCGA GGTTCCGCAA CCCGATCCGG 
GGGGCTGCGG ACATCCACCG GCTGGGTGTG CCGGATCCGG AAGCGGAGCT GGCCTACGTG 
CCGGCCGCGG TGCGGCTGAT CAAGCAGCGC CTGGGTGATC GGGCCCCGTT GATCGGGTTC 
TCGGGCAGTC CCTGGACCCT GGCGACCTAT ATGGTGGAAG GGGGCAGCAG CCGGGAGTTC 
CGCAAGGTCA AATGCCTCAT GTACGAGGAG CCGGCGCTGA TGCACGAACT GCTGGAAAAG 
CTTGCTGATG CGGTCGCCTT GTATCTGAAC GCCCAGATCG CGGCGGGCGT CGATGCCGTG 
ATGGTGTTCG ACACCTGGGG CGGCAATCTG GATACGGAGC ACTATCTGGC ATTTTCGCTG 
CGCTACGCCG AGCGCGTGCG CCAGCAGCTC CGGCTGACCG GGCGGGGCCG CATCCCCGCG 
ATCTTCTTCA CCAAGGGCGG CGGGCAATGG CTGGAGGCGA TGGCGGACGC CGGTTATGAC 
GCGCTCGGTC TGGACTGGAC CACGGACATC GGTTCGGCGA GACAGAGGGT CGGCGACAGG 
GTGGCTTTGC AGGGCAACCT CGATCCGGTG GCGCTCTATG CCAGACCCGA AATCATTCGC 
GGGGAAGTCC GGAAGATCCT GGAGCGTTAC GGTAGGGGCA GCGGCCATGT GTTCAACCTC 
GGCCATGGGG TCACGCCCGA CATCAAGCCC GAGCATGTGG GCGCGATGAT CGAGGCGGTG 
CACGAATTCA GCCCGGCGTT CCACCGGACT TGA 

 

Protein sequence

MTHCFIRALL RQPVERTPVW MMRQAGRYLP EYREVRERAG SFMNLCTSPE LACEVTLQPL 
ERYRLDAAIL FSDILTVPDA MGLGLEFVEG EGPRFRNPIR GAADIHRLGV PDPEAELAYV 
PAAVRLIKQR LGDRAPLIGF SGSPWTLATY MVEGGSSREF RKVKCLMYEE PALMHELLEK 
LADAVALYLN AQIAAGVDAV MVFDTWGGNL DTEHYLAFSL RYAERVRQQL RLTGRGRIPA 
IFFTKGGGQW LEAMADAGYD ALGLDWTTDI GSARQRVGDR VALQGNLDPV ALYARPEIIR 
GEVRKILERY GRGSGHVFNL GHGVTPDIKP EHVGAMIEAV HEFSPAFHRT