Gene MCA0330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA0330 
SymbolaroK 
ID3102291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp325746 
End bp326285 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content62% 
IMG OID637169550 
Productshikimate kinase 
Protein accessionYP_112862 
Protein GI53802349 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.15338 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAAACC GTCGAAACAT CTTCCTGATC GGCCCGATGG GAGCGGGCAA GACCACCGTG 
GGACGTCTGC TCGCCCGTGC CCTGGGGATG GAGTTCTGGG ACAGCGACAA GGAAATCGAA
CGCCGGACCG GCGTCACGGT GCCGATGATT TTCGAATACG AGGGCGAGGC CGGATTCCGG
CGCCGCGAAT CGGAAGTCAT CGCCGATCTC ACGGGCAAGG AAAGGATCGT GCTGGCCACC
GGCGGCGGTT CGGTGCTGGC AGCGGAGAAC CGGGAGCATC TGGCGGCACG GGGGCTGGTA
ATTTACCTGC AGTGTTCGGT CCAGAAGCAG TTGGAGAGGA CGCACAAGGA CATGAACCGG
CCCTTGTTGC AGACGGAGAA TCCCAGGCAA AGGCTGGAAG AACTGCTGCG GGTGAGGGAT
CCCATCTACC GCGAGCTTGC CGACTACGTC GTCGATACCG GCCAGCATTC GAGCCGCAGT
GCCGTGCGCC GGATCATCAA CGCCTACGAG AAATCCGGAA CCAGACTGCG GACGGAATGA
 
Protein sequence
MRNRRNIFLI GPMGAGKTTV GRLLARALGM EFWDSDKEIE RRTGVTVPMI FEYEGEAGFR 
RRESEVIADL TGKERIVLAT GGGSVLAAEN REHLAARGLV IYLQCSVQKQ LERTHKDMNR
PLLQTENPRQ RLEELLRVRD PIYRELADYV VDTGQHSSRS AVRRIINAYE KSGTRLRTE