Gene MCA0327 details

Gene Information

• Locus tag: MCA0327
• Symbol: pilO
• ID: 3102112
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 322328
• End bp: 322966
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637169547
• Product: type 4 fimbrial biogenesis protein PilO
• Protein accession: YP_112859
• Protein GI: 53802352
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG3167] Tfp pilus assembly protein PilO

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAACCTCG CGAAGATCAA CTGGGACCTC GAGTATGCCG GGTCCTGGCC GACGCCGGTC 
AAACTCGCCG TCATCGCCGT GCTGAGTACC GTGCTTGCCG GTGTCTGGTA TTACCTCGAC 
ACCCGTACCC AGTTGGCCGG ACTGGAGGAT CAGCAGCGCC GGGAGCAGGA GCTCAAGGAA 
ACCTTCGAGA TCAAACAGAA AAAGGCGGTC AACCTCGAAG AATACAAGCT GCAACTTGCG 
GACATCGAGA AGACCTTCGG TGACCTGCTG CGGCAGCTTC CCGACCGCAC CCAGGTGCCC 
GATCTGCTGG TGGACGTTTC CCAGACCGGT CTGGCAAGCG GCCTCGAGTT CGAGCTGTTC 
AAGCCGGGCG GGGAGGTTTC CAAGGAATTC TATGCCGAAC TGCCGATCGA GATCCGGGTC 
GTCGGAACCT ACATGGAGTT CGGAGCCTTC GTAAGCGGCC TGGCGTCGCT TCCCCGGATC 
GTGACCGTCC ACAACGTGAA GATCGTTTCG CGTTCCGCCG ATGGCGCAGG GCCCAAGCCC 
GGCGAGGCCG AACTGGTCAT GACGGCGCTG GTGAAGACTT ATCGCTACCT CGACGACGGC 
GCCGTACCGT CCTCCCCGGC TGACCGCGGG CGACGCTGA 

 

Protein sequence

MNLAKINWDL EYAGSWPTPV KLAVIAVLST VLAGVWYYLD TRTQLAGLED QQRREQELKE 
TFEIKQKKAV NLEEYKLQLA DIEKTFGDLL RQLPDRTQVP DLLVDVSQTG LASGLEFELF 
KPGGEVSKEF YAELPIEIRV VGTYMEFGAF VSGLASLPRI VTVHNVKIVS RSADGAGPKP 
GEAELVMTAL VKTYRYLDDG AVPSSPADRG RR