Gene MCA0326 details

Gene Information

• Locus tag: MCA0326
• Symbol: pilN
• ID: 3102805
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 321696
• End bp: 322331
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637169546
• Product: type 4 fimbrial biogenesis protein PilN
• Protein accession: YP_112858
• Protein GI: 53802362
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG3166] Tfp pilus assembly protein PilN

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGGCCTG GCACTGCGGA GTTTCGACTG ATGGCGCGCA TCAACCTCCT GCCCTGGCGC 
GCTGCGCTCA GGCGCGAACG GCAGAAGGAA TTCGCCCTCT GGACCGGGCT CGGTCTCGCC 
CTGACCGCGG CGATGATGCT GCTGATACGG ACCCAGATCA GTGCCGCCAT GGACACCCAG 
AATCGGCGGA ATCAGTATCT CGAGGGCGAG ATAGGGGCGC TGGAGCGCCA GATCGCGGAA 
ATCAGGGACC TGGAAGCCAA GAAGAGCCGG CTGGTGGCCA AGATGGAAAT CATCCAGCAA 
CTGCAGTTGA GCCGGCCGGA AGAAGTGCAT CTGTTCGACG AAATCGCGCG GACGGTGCCG 
GAAGGTGTCA GCCTGCGGGA CTTGACCCAG GAGGAGCGCG CCATCACGGT CAACGGCTTC 
GCCCAGTCCA ATGCCCGGGT TTCCGCCTAC ATGCGCAATC TGGAAGGATC GGAGTGGTTG 
TACGATCCGG TCCTGGAGGT CATCGAAAAC AAGCAGGATG CACAGGGAAG GGGCAAGGAA 
CGGGAGAAGG GTAGCCGGTT CACCCTGCGA ATGAAACAGG GTCCCAGGGG CCGGACCGGC 
GAAGAGTCGC TGCCAGGGGG CAAGGCGGCG CCGTGA 

 

Protein sequence

MRPGTAEFRL MARINLLPWR AALRRERQKE FALWTGLGLA LTAAMMLLIR TQISAAMDTQ 
NRRNQYLEGE IGALERQIAE IRDLEAKKSR LVAKMEIIQQ LQLSRPEEVH LFDEIARTVP 
EGVSLRDLTQ EERAITVNGF AQSNARVSAY MRNLEGSEWL YDPVLEVIEN KQDAQGRGKE 
REKGSRFTLR MKQGPRGRTG EESLPGGKAA P