| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA0233 |
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| Symbol | nifE |
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| ID | 3102543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | + |
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| Start bp | 231399 |
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| End bp | 233081 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637169455 |
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| Product | nitrogenase iron-molybdenum cofactor biosynthesis protein nifE |
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| Protein accession | YP_112768 |
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| Protein GI | 53802570 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
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| TIGRFAM ID | [TIGR01283] nitrogenase molybdenum-iron cofactor biosynthesis protein NifE |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0640534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGCT TATCGAGCAA GATTCAGGAC GTCTTCAACG AGCCGGGTTG CGGCAAGAAC
CAGGGCAAGT CCGAGAAGGA ACGCAAGAAG GGCTGCACCA AGCAGTTACA GCCCGGCGGG
GCCGCCGGCG GCTGCGCCTT CGACGGCGCC AAGATCGCCC TGCAGCCGAT CACCGACGTG
GCCCATCTGG TCCACGGCCC CATCGCTTGC GAAGGCAATT CCTGGGACAA CCGTGGCTCC
AAGTCCTCCG GCTCCAACCT CTGGCGCACC GGTTTCACCA CCGACATCAA TGAGACCGAC
GTGGTGTTCG GCGGCGAGAA GCGGCTGTAC AAGTCCATCA AGGAGATCGT CGAGAAATAC
GACCCGCCCG CGGTCTTCGT CTACCAGACC TGCGTGCCGG CCATGATCGG CGACGACATC
GAAGCCGTGT GCAAAGCGGC CTCGAAGAAA TTCGGCAAGC CGGTGATCCC GGTCAACTCC
CCCGGTTTCG TCGGTCCGAA AAACCTGGGC AACAAGCTGG CGGGCGAAGC CATCCTCGAC
CATGTCATCG GTACCGAGGA GCCTTCCTAC ACCACGCCTT ACGACATCAA CATCATCGGC
GAATACAACC TGTCCGGCGA GCTATGGCAG GTGAAGCCGC TGCTGGACGA GCTCGGCATC
CGCATCCTGT GCTGCATCTC CGGCGATGCC AAATACCGCG ACGTGGCCTG TTCGCACCGG
GCCCGGGCGG CGATGATGGT GTGTTCCAAG TCCATGATCA ACATCGCCCG CAAGATGGAG
GAGCGCTATG GCATCCCCTT CTTCGAGGGT TCTTTCTACG GCATCGGCGA CACCAGCGAC
GCCTTGCGCG AGATTGCGCG GCTGCTGATC GAGCGTGGCG CGCCGGCGGA GCTGATGGAG
CGCACCGAAG CCCTGATAGC CCGTGAGGAA GCCCGGGCCT GGGCCGCGAT CGAACCGTAC
AAGAAGCGCC TGACCGGCAA GAAGGTGCTG CTCATCACCG GCGGCGTGAA ATCCTGGTCC
GTGGTGGCCG CGTTGCAGGA AAGCGGCATG GAGGTGGTCG GCACCAGCGT GAAGAAATCG
ACCAAGGAAG ACAAGGAGCG CATCAAGGAG ATCATGGGCG AGGACGCCCA CATGATCGAC
GACATGACGC CGCGCGAAAT GTACAAGATG CTCAAGGAGG CCAAGGCCGA CATCATGCTG
TCCGGCGGGC GTTCCCAGTT CGTCGCGCTC AAGGCCAAGA TGCCCTGGCT GGACATCAAC
CAGGAGCGCC ATCACGCCTA CATGGGCTAT GTGGGCATGG TGGAACTGGT CAAGGAAATC
GACAAGGCGC TGTTCAATCC AGTCTGGGAG CAGGTGAGGA AGCGCGCACC CTGGGAGGAA
ACCACCTGGG AAGAGCGGGC CGACGCGGCT CTCGCCGCCG AAGCCGCCGC GTTGGCCGCC
GATCCGGAGC TGGCCAGGGC GCAGCGCCGC GCCGCCCGCA TCTGCAAGTG CAAGGCGGTG
GACCGCGGTG CCATCGAGGA CGCCATTCTC GCGTACGGGC TGGAAAGCGT CGAAGCGGTG
ACCGAGCGTA CCCACGCGGG CAGCGGCTGC ACCGGTTGCA CCGGAACGAT CGCCGGCATC
CTCGACGGCA TCGAAGACTG GCGGCCGGCT CCCTCGGCTG AACCGGCAAA ACGGGCAGCC
TGA
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| Protein sequence | MSSLSSKIQD VFNEPGCGKN QGKSEKERKK GCTKQLQPGG AAGGCAFDGA KIALQPITDV
AHLVHGPIAC EGNSWDNRGS KSSGSNLWRT GFTTDINETD VVFGGEKRLY KSIKEIVEKY
DPPAVFVYQT CVPAMIGDDI EAVCKAASKK FGKPVIPVNS PGFVGPKNLG NKLAGEAILD
HVIGTEEPSY TTPYDINIIG EYNLSGELWQ VKPLLDELGI RILCCISGDA KYRDVACSHR
ARAAMMVCSK SMINIARKME ERYGIPFFEG SFYGIGDTSD ALREIARLLI ERGAPAELME
RTEALIAREE ARAWAAIEPY KKRLTGKKVL LITGGVKSWS VVAALQESGM EVVGTSVKKS
TKEDKERIKE IMGEDAHMID DMTPREMYKM LKEAKADIML SGGRSQFVAL KAKMPWLDIN
QERHHAYMGY VGMVELVKEI DKALFNPVWE QVRKRAPWEE TTWEERADAA LAAEAAALAA
DPELARAQRR AARICKCKAV DRGAIEDAIL AYGLESVEAV TERTHAGSGC TGCTGTIAGI
LDGIEDWRPA PSAEPAKRAA
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