| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA0230 |
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| Symbol | nifD |
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| ID | 3102880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | + |
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| Start bp | 227222 |
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| End bp | 228682 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637169452 |
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| Product | nitrogenase molybdenum-iron protein alpha chain |
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| Protein accession | YP_112765 |
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| Protein GI | 53802573 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
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| TIGRFAM ID | [TIGR01282] nitrogenase molybdenum-iron protein alpha chain
[TIGR01862] nitrogenase component I, alpha chain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.403364 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCCTCA CAGTTGAGCA AGTCAAACAG AGAAACAAGG ACCTCATCAA AGAGGTGCTT
GAGGTTTATC CCGACAAGAC GGCCAAGCGC CGCGCCAAGC ACCTTGGCAC CTTCGAAGAA
GGCAAGCCCG ACTGCGGGGT CAAATCCAAC ATCAAGTCGA TCCCCGGTGT CATGACCATC
CGCGGCTGCG CCTACGCCGG TTCCAAGGGC GTGGTCTGGG GCCCGATCAA GGACATGATC
CACATCAGCC ACGGTCCGGT CGGCTGCGGC CAGTATTCCT GGGCGTCGCG CCGCAACTAC
TACATCGGCA CCACCGGCAT CGACACCTTC GTCACCATGC AGTTCACCTC CGACTTCCAG
GAGAAGGACA TCGTCTTCGG CGGCGACAAG AAGCTGGAGA AGATCATCGA CGAAATCGAG
GAACTGTTCC CGCTGAACCA CGGCATCACC GTTCAGTCGG AATGCCCGAT CGGCCTCATC
GGCGACGACA TCGAAGCGGT TTCCAAGAAG AAATCCAAGG AATACAGCGG CAAGACCATC
GTTCCCGTCC GTTGCGAAGG TTTCCGCGGC GTGTCCCAGT CGCTGGGCCA TCATATCGCC
AACGACGCGG TGCGCGACTG GGTGTTCGAC AAGGCCGGCG ACAAGCACCC CGAGTTCCAG
TCCACGCCTT ACGACGTCGC CATCATCGGC GACTACAACA TCGGCGGCGA TGCCTGGTCT
TCCCGCATCC TGCTGGAAGA AATGGGGCTG CGCGTGATCG CCCAGTGGTC CGGTGACGGC
ACCCTGGCCG AGCTGGAAAA CACGCCGAAG GCCAAGCTGA ACGTGCTGCA CTGCTACCGT
TCGATGAACT ACATCTCCCG CCACCTGGAA GAGAAGTACG GCGTGCCCTG GGTCGAGTAC
AACTTCTTCG GTCCCACCAA GATCGCCGAG TCGCTGCGCA AGATCGCCAG CTTCTTCGAC
GACAAGATCA AGGAAGGTGC GGAGCGCGTC ATCGCCAAGT ACCAGCCGCT GATGGATGCG
GTGATCGCGA AGTACCGTCC GCGTCTGGAA GGCAAGAAGG TCATGCTGTT CGTCGGTGGC
CTGCGTCCGC GTCACGTGAT CGGCGCCTAC GAGGACCTGG GAATGGAGAT CGTCGGTACC
GGCTACGAGT TCGGCCACAA CGACGACTAC CAGCGCACCA CGCACTACGT CAAGGACGGC
ACGCTGATCT ATGACGACGT GACGGGCTAT GAGTTCGAGA AGTTCGTCGA AGCCATCCAG
CCCGACCTGG TCGGCTCCGG CATCAAGGAA AAGTACGTCT TCCAGAAGAT GGGCGTGCCG
TTCCGCCAGA TGCACTCCTG GGACTATTCC GGTCCGTACC ACGGTTATGA CGGCTTCGCC
ATTTTCGCCA GGGACATGGA CATGGCCATC AACAACCCGG TCTGGGGGAT GACCAAGGCC
CCGTGGAAGA GCGCGGCTTA A
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| Protein sequence | MSLTVEQVKQ RNKDLIKEVL EVYPDKTAKR RAKHLGTFEE GKPDCGVKSN IKSIPGVMTI
RGCAYAGSKG VVWGPIKDMI HISHGPVGCG QYSWASRRNY YIGTTGIDTF VTMQFTSDFQ
EKDIVFGGDK KLEKIIDEIE ELFPLNHGIT VQSECPIGLI GDDIEAVSKK KSKEYSGKTI
VPVRCEGFRG VSQSLGHHIA NDAVRDWVFD KAGDKHPEFQ STPYDVAIIG DYNIGGDAWS
SRILLEEMGL RVIAQWSGDG TLAELENTPK AKLNVLHCYR SMNYISRHLE EKYGVPWVEY
NFFGPTKIAE SLRKIASFFD DKIKEGAERV IAKYQPLMDA VIAKYRPRLE GKKVMLFVGG
LRPRHVIGAY EDLGMEIVGT GYEFGHNDDY QRTTHYVKDG TLIYDDVTGY EFEKFVEAIQ
PDLVGSGIKE KYVFQKMGVP FRQMHSWDYS GPYHGYDGFA IFARDMDMAI NNPVWGMTKA
PWKSAA
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