Gene MCA0171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA0171 
Symbol 
ID3102331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp181951 
End bp182469 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content67% 
IMG OID637169394 
Productputative lipoprotein 
Protein accessionYP_112708 
Protein GI53802516 
COG category[R] General function prediction only 
COG ID[COG3218] ABC-type uncharacterized transport system, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACGCC TTTCCTGGAC ACTGATGCTC TCGCTCGCCA CATCCGCCTG CAGCCTGTTG 
CCGGAACGCC CGCCCCAACC CGCGCTGCAC GATTTCGGTG CCGCCGGCGC CGCTGCACCG
GCACCCTGGT CTTCAGTCGA CGTCGACGCT CCGGAGTGGC TTCGGAACGA CCGCCTGCAG
TACCGCCTGC TCTACGCCAA GCCGACCGAA CTGCGCTCCT ATACCCTGGA TCGCTGGATC
GCGCCGCCGT CCGAGCTCCT GGAACAACGG CTGAAAGCCG GCCGCAGCGC CAATGGCTAC
CGTTTGCATA TCGAACTCCA GGCATTCGAA CAAGTGTTCG AACGCCCCGG CAGTTCTCAT
GTCATGATCC GCCTCCGCGC CGAAACGCCG GCAGACACCG AAACGTTCCA ATTCGACCAG
CCCACGGCCA GCCCGGATGC CGCCGGCGCG GTCCAGGCGT TTGCGCAGGC GGTCGACCGT
GCCGTTGCCC AGCTCCGGGC GTGGCGACCG GCGAACTGA
 
Protein sequence
MRRLSWTLML SLATSACSLL PERPPQPALH DFGAAGAAAP APWSSVDVDA PEWLRNDRLQ 
YRLLYAKPTE LRSYTLDRWI APPSELLEQR LKAGRSANGY RLHIELQAFE QVFERPGSSH
VMIRLRAETP ADTETFQFDQ PTASPDAAGA VQAFAQAVDR AVAQLRAWRP AN