| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA0169 |
|---|
| Symbol | |
|---|
| ID | 3104612 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | + |
|---|
| Start bp | 179753 |
|---|
| End bp | 180544 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637169392 |
|---|
| Product | ABC transporter, permease protein, putative |
|---|
| Protein accession | YP_112706 |
|---|
| Protein GI | 53802518 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0390] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00245] conserved hypothetical protein TIGR00245 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.645871 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACACGG TCGACATATC CCCGACGAGA ATGATGCTGC TCTACGGCAT CGCCGTGCTG
CCCTGGCTGC TGCTGTGGAG CGCGGGGTTG CATCTCGCGC GCGAACTGTG GCTGAGCATC
GTCCGGATGA GCGTGCAACT GGCGCTGGTC GGCATCTATC TCAAATACCT GTTCGAGATC
AACGCGCCGG CGCTCAACGT CCTGTGGATC GTGGTCATGC TGGTGGTGGC CGATTTCACC
ATTCTCCGCC GGGCGGGTCT CCGCATCAGG CATTTTTTCC TTTCGACGCT TGCGGCCATC
GTGGCCGGAA CGGCGTTCTC GGTGGCTTAT CTGCTGCTTC TGGTGATCCG GCCGGAGCCG
ATCTACGACG CGCGTTATCT GGTGCCGCTG GCCGGCATGA TCCTCGGCAA CTGTCTGCAG
GGCAACGTGA TCGGGCTGGA GCGGTTCTAC TCCGCGATCC GGAAAAACGA GAACGAATAC
CTTACCTATC TGCTGCTGGG TGCGACCCGC CGCGAAGCGG TACGGCCATA TTTCCGCGAG
GCGCTCAAGG CTTCCGTCAA CCCGACGTTG GCTAGCATGG CGACCCTCGG ACTGGTCTCC
CTGCCGGGCA TGATGACCGG CCAGATACTC GGCGGCAGCG AACCCTGGGT GGCGGTGAAA
TACCAGATCG CCATCATGCT CTGCATCTTC GCCAGCATGA GCCTGGCTGC CGTGCTCAAC
CTCTCACTCA GCCTGCGCTT CGCCTTCGAC GAGTTCGGCG TGCTGCGGGA GGCGGTTTTC
CGACGACACT GA
|
|---|
| Protein sequence | MDTVDISPTR MMLLYGIAVL PWLLLWSAGL HLARELWLSI VRMSVQLALV GIYLKYLFEI
NAPALNVLWI VVMLVVADFT ILRRAGLRIR HFFLSTLAAI VAGTAFSVAY LLLLVIRPEP
IYDARYLVPL AGMILGNCLQ GNVIGLERFY SAIRKNENEY LTYLLLGATR REAVRPYFRE
ALKASVNPTL ASMATLGLVS LPGMMTGQIL GGSEPWVAVK YQIAIMLCIF ASMSLAAVLN
LSLSLRFAFD EFGVLREAVF RRH
|
|---|
| |