| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA0143 |
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| Symbol | mdoD |
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| ID | 3103503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | + |
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| Start bp | 148339 |
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| End bp | 149970 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637169368 |
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| Product | glucan biosynthesis protein D |
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| Protein accession | YP_112682 |
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| Protein GI | 53802574 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3131] Periplasmic glucans biosynthesis protein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATCCT CGCCATTGCT TTCTATTTTC TTCCGTAGGG CTGAGTTACT CATGATAGGA
AAGACGAGTC GACGCGATTT CATGCGCCTG GGCGCGAAGC TCGGGCTGGC CGCTCCCTTC
CTGGCGGGCG TGGGGCGGAG CTGGGCGGAA CCGAAAGGGC TCAAGTTCAG CCCATCCCTT
CCCTTCAGCT ACGAGATGTT GGTCAAGCGG GCGGAGGCGC TCGCCTCGCG CCCCTACTCG
CCGCCGCCGG CCGTCTCCGA GGTGGTGCGC AAACTGGATT ATGAGGCTTG GGGGCAGATC
CGGTTCCGGA CCGAGGACGC CTTGTTCGCC GAAGGGCCGT CCATTTATCC GGTCACGTTT
TTCCACCTCG GCCAGTTTTT CCAGAAACCC GTCAAGATTC ACGTCGTAGA GGATGGAAAA
GCGCGCCAGA TCTACTACAG CGCCGAGTAT TTCGACATGC CGGGTGACAG CCCGGCCCGG
CAAATGCCGG AACGATCGGG CTTCGCCGGT TTCCGTCTGC AAGAGGCCCG CACCCGCTCG
GACTGGCGCA CGCAGGATTG GATCGCCTAC CTGGGGGCGT CCTACTTCCG GGCGATCGGC
GCGCTCAACC AATACGGTCT GTCGGCGCGC GGCATCGTCA TCGACGCGGC CGAGCCGACG
CCTGAGGAAT TCCCCGATTT CACCGAGTTT TACATCGAGG GCGCCGCGGC GGAAACCGAT
CCGGTCATCA TCTGCGCGCT GCTGGACGGC CCCAGCGTCA CCGGAGCGTA CCGCTTCCTC
ACTTGGCGGA AAGAGGGGGT GGTGCAGGAG GTCGAAGCGG CGGTGTTCCT GCGCCGGAAT
GTCAAGCGGC TCGGTCTCGC GCCGTTGACC TCGATGTATT GGTTCAGCGA GTCGGAGAAG
CGGAGGTTGG AGGACTGGCG GCCCGAGGTC CACGATTCCG ACGGCCTGGC CATTTGGACC
GGTACGGGGG AGCGCATCTG GCGACCGCTG ATCAATCAGC CGTACGCGGT GACATCGAGT
TTCGTCGACC ACGATCCCAA GGGATTCGGT CTGCTCCAGC GCGACCGGGT GTTCGAAAAT
TATCTCGACG GCGTGAATTA CGAGCGGCGA CCCAGCCTGT GGGTCGAGCC GCTCGGCGGC
TGGGGAGAAG GGGCGGTGCA ACTGGTCGAG CTGCCCACGG ATGACGAGAT CCACGACAAC
ATCGGTGTTT ACTGGCGGCC GGCGGCGGCG CCCAAGGCCG GTTCATCTTA CCGCTTACGG
TATCGCTTGC ACTGGCAGGC CGACGAACCT TATCCGGCCG CCGTCGCCCG CTGCGTCGCG
ACCCGCATCG GTCGGGGCGG TCAGCCCGGC AAGCCCCGGC CTCGCGGAGT CTACAAGTTT
GCGGTGGAAT TTGCCGGCGC GGCGCTGGAG CCGTTGTGGG GCGACACCGT GAAGGCGGCG
CCGGTCGTCA CGGCTTCCAG CGGGGCGATT CAGGGGGCTT TCATCGAGCC GATCCCTCAT
ACCCGCCGTT GGCGGGCGAT TTTCGACCTG ATCCCCGACG GTACCGCTCC GGTCGAACTG
CGCCTCTACA TCCAGGGCAA CGGCGATGCC CTCACCGAAA CCTGGCTGTA CCAGTTCCGG
CCGCCGGCCT GA
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| Protein sequence | MSSSPLLSIF FRRAELLMIG KTSRRDFMRL GAKLGLAAPF LAGVGRSWAE PKGLKFSPSL
PFSYEMLVKR AEALASRPYS PPPAVSEVVR KLDYEAWGQI RFRTEDALFA EGPSIYPVTF
FHLGQFFQKP VKIHVVEDGK ARQIYYSAEY FDMPGDSPAR QMPERSGFAG FRLQEARTRS
DWRTQDWIAY LGASYFRAIG ALNQYGLSAR GIVIDAAEPT PEEFPDFTEF YIEGAAAETD
PVIICALLDG PSVTGAYRFL TWRKEGVVQE VEAAVFLRRN VKRLGLAPLT SMYWFSESEK
RRLEDWRPEV HDSDGLAIWT GTGERIWRPL INQPYAVTSS FVDHDPKGFG LLQRDRVFEN
YLDGVNYERR PSLWVEPLGG WGEGAVQLVE LPTDDEIHDN IGVYWRPAAA PKAGSSYRLR
YRLHWQADEP YPAAVARCVA TRIGRGGQPG KPRPRGVYKF AVEFAGAALE PLWGDTVKAA
PVVTASSGAI QGAFIEPIPH TRRWRAIFDL IPDGTAPVEL RLYIQGNGDA LTETWLYQFR
PPA
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