| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA0136 |
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| Symbol | rpoH |
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| ID | 3103365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | + |
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| Start bp | 140773 |
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| End bp | 141633 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637169361 |
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| Product | RNA polymerase factor sigma-32 |
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| Protein accession | YP_112675 |
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| Protein GI | 53802588 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.27298 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTACG AATTGACTCT CCCGACCCAT TTGCCGCTGG GGTCCATCGA CGATTATTTC
GCCGCGGTGA ACCGTCTGCC GCGGCTGGAT GCCGATGAGG AACGGGAACT GGCGATCCGT
TTCCGTGACG AGCAGGATCT GGAGGCTGCC CGGCGCTTGG TGTTGGCGAA TCTGCGTTTC
GTGGCCTACA TCGCGCGGGG TTACCTCGGC TACGGGCTGC CGCTGGCGGA TCTGATCCAG
GAGGGCAATA TCGGTTTGAT GAAAGCCGTC AAGCGCTACG ACCCGGATGT CGGCGTGCGG
CTGGTCTCGT TCGCCGTGCA CTGGATCCGC GCCGAGATCC ATGAATTCAT CATCCAGAAC
TGGCGCATCG TGAAGATTGC GACCACCAAA GCCCAGCGCA AGCTGTTTTT CAATTTGCGC
AAGATGAAGA ATCGCCTGGG CTGGCTCACT CCCGAGGAAG CCGCGGCGGT GGCAGCCGAG
TTGGGCGTGG ACGTCGAGGA CGTCTACAAG ATGGAGAACC GGCTGAACAA CCCGGATATG
GCGCTTGAGG CGCATGGCGA GGACGACGGC GACGACCGCG AGAGTCATGC GCCCATCCAT
TATCTCCAGC AAGAAGGAGG CGACCCGGCG CTGCTCATCG AGCACAGCGA ATGGGAAAAC
CGCCAGCAGG AAAAACTGCA GGAAGCCATC GGCCAGCTCG ACGAACGCAG CCGTGACATC
GTGGCCAGCC GCTGGCTCAG CGAAGACAAG CTCACACTCC ACGATCTGGC GGCGCGCTAC
AACGTCTCGG CCGAGCGTAT CCGCCAGCTC GAGAGCAGCG CGATGAAGAA ACTGCGGAAC
GCTCTCGCCG ACGCCGCTTA G
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| Protein sequence | MTYELTLPTH LPLGSIDDYF AAVNRLPRLD ADEERELAIR FRDEQDLEAA RRLVLANLRF
VAYIARGYLG YGLPLADLIQ EGNIGLMKAV KRYDPDVGVR LVSFAVHWIR AEIHEFIIQN
WRIVKIATTK AQRKLFFNLR KMKNRLGWLT PEEAAAVAAE LGVDVEDVYK MENRLNNPDM
ALEAHGEDDG DDRESHAPIH YLQQEGGDPA LLIEHSEWEN RQQEKLQEAI GQLDERSRDI
VASRWLSEDK LTLHDLAARY NVSAERIRQL ESSAMKKLRN ALADAA
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