Gene MCA0129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA0129 
SymbolapbE 
ID3102831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand- 
Start bp134125 
End bp135210 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content64% 
IMG OID637169354 
Productthiamin biosynthesis lipoprotein ApbE 
Protein accessionYP_112668 
Protein GI53802603 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.791974 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCTCC CGATTCTGCG CCGTTTCGGC GGACTCCTCC TCGGCGCCAC GCTCGTTGCC 
TGCCAGACCG GGGAAGACGA AACCCTGCTC TCGGGCGACG TGCAGGGGAC CACTTACCAC 
ATCAAGATGG TGCTGGACGG CCTGCCGGCC GACCAGACCG AATTGAAGCA AGCCGTGGAT 
GCCGTCTACG ACGACATCGA CCTCAAGCTA TCGAACTACC GGGAAGATTC GGAAATCTCC 
CGTATCAACC GCGCAGCCAC GACCGACTGG CTGACCGTTT CGCCCGAGAT CGCCGAGCTG 
GTCGACATCG CCCGCCAGGT GCATGACAAG ACCGACGGCT GTTACGACCT GACGGTCAAA 
CCCCTGTTCG ACCTGTGGGG CTTCTCGCGC CATCAGACCC GCGTGCCGAC CGACGCCGAA 
ATCGCCGCGG TGCTGCCTCA CATCGGCATG GACAAGCTGG AAGTGGACGT TCCCGGCCGG 
CGCCTGCGCA AAAAGGATCC AGCGCTTCGC ATCGACCTGT CCTCCATAGC CCAGGGCTAC 
ACCGTCGGCC GGGTAGCCGG CCTGCTGGAA GCAAAGGGCA TCCAGAACTA CCTGGTCGAG 
GTCGGCGGAG AGATGCAGGT CAAGGGCCGC AAGGCCAACG GCAAACCCTG GCGCGTCGCC 
GTGGAAAAAC CCACGCCCTA TACCCGGGAA GTCGAACGGA TATTGGATGT CCACCAGACG 
GAGGGGACCG CCATCATGAC CTCGGGCACT TATCGCAATT TCTTCGAGGA GGGAGGCAAG 
ACCTACTCGC ATATCCTCGA TCCCAGGACC GGCCGGCCCG TCGACCATCA TTTGCTGTCG 
ACCACGGTGC TTCATCCCGA CCCCACGTGG GCGGACGCGT GGTCCACCGC ATTGCTTTGC 
CTGGGCGAGC AAAAGGGTTA CGCCATCGCT GAACGGGAGC GGCTCAAGGC ATTGCTGATC 
TACGGCGAAA ACGGCGGGCT GAAAGAGCGG TTTACTCCGG CCTTCGGCGC CGAAATGCCA 
ATGGCGACGA GGCCGGCCTC GCCCCTTTCG ACCCGGGCCC CCGCCGCGGT AACCGAGACG 
CGCTAA
 
Protein sequence
MTLPILRRFG GLLLGATLVA CQTGEDETLL SGDVQGTTYH IKMVLDGLPA DQTELKQAVD 
AVYDDIDLKL SNYREDSEIS RINRAATTDW LTVSPEIAEL VDIARQVHDK TDGCYDLTVK 
PLFDLWGFSR HQTRVPTDAE IAAVLPHIGM DKLEVDVPGR RLRKKDPALR IDLSSIAQGY 
TVGRVAGLLE AKGIQNYLVE VGGEMQVKGR KANGKPWRVA VEKPTPYTRE VERILDVHQT 
EGTAIMTSGT YRNFFEEGGK TYSHILDPRT GRPVDHHLLS TTVLHPDPTW ADAWSTALLC 
LGEQKGYAIA ERERLKALLI YGENGGLKER FTPAFGAEMP MATRPASPLS TRAPAAVTET 
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