Gene MCA0086 details

Gene Information

• Locus tag: MCA0086
• Symbol: pilE
• ID: 3103989
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: -
• Start bp: 89664
• End bp: 90116
• Gene Length: 453 bp
• Protein Length: 150 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637169311
• Product: type 4 fimbrial biogenesis protein PilE
• Protein accession: YP_112625
• Protein GI: 53802696
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4968] Tfp pilus assembly protein PilE
• TIGRFAM ID: [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCCGAAC CGAACGGAAA GGTAAGCATT ACTCCCGCCC GCCGGGCGGC GGAGGGACGG 
GGATTCTCCC TGCTCGAACT GATGATCACC GTGGCCATCA TCGGCATCCT CGCCACCGTC 
GCCTACCCGT CCTACAAAGA ACACATCGTC CGGACCCGCC GCGCCGACGG CAAAGCCGCG 
CTCCTGCGGG CCGCCGCACG CGAGGAGCAG TACTTCATGG ACAACAAGAC CTATACGAGC 
GACGTCACCA GACTCGGTTT CGCCTCCAAC GGGAAATCCG ACGAAGGCCA TTACGTCATT 
TCCGTGACCG CCGCCGACGC CAATGGCTTC ACGCTGCAAG CGACGCCGCA GAGTCCGCAC 
ACCGACGCAC TCTGCGGCAA TCTCACCCTG AACTCCCTGG GCGTGAAAGG AAAATCCGGC 
TCCGGCTCCG TCGCCGATTG CTGGAACTGG TAA 

 

Protein sequence

MAEPNGKVSI TPARRAAEGR GFSLLELMIT VAIIGILATV AYPSYKEHIV RTRRADGKAA 
LLRAAAREEQ YFMDNKTYTS DVTRLGFASN GKSDEGHYVI SVTAADANGF TLQATPQSPH 
TDALCGNLTL NSLGVKGKSG SGSVADCWNW