| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA0079 |
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| Symbol | |
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| ID | 3104472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | - |
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| Start bp | 80931 |
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| End bp | 84017 |
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| Gene Length | 3087 bp |
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| Protein Length | 1028 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637169304 |
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| Product | AcrB/AcrD/AcrF family protein |
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| Protein accession | YP_112618 |
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| Protein GI | 53802703 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.60921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGGCG CCTTGGTCCG CTTCGCGGTG TGCCGCAGCG GTGTCGTGAT CGCGCTCGCG
GTGCTGCTGG CGGCCTACGG CCTGTACCGT GCAGCGACGG CGAAACTAGA CATCTTTCCC
GAATTTTCCG CCAAGCGGGT GGTGGTGCAG ACCGAAGCCC CGGGCCTCAC CACCCGGCAG
GTCGAGATCC TCCTGACCCT ACCCATCGAG CGAAAGCTGG CCGGCATCGT CGGACTGGAA
ACCCTGCGCT CGGAGTCGAT CCAGGGCTTG TCGGTGGTAA CGGCGGTATT CGCCGAGGAA
ACCGACATCT ACCGCGACCG GCAACTGGTG AGTGAACGCT TGGCGCTGCT GGCCGGTCAG
CTTCCGGAAG GCGCGGGGAC GCCGGTCCTG GTGCCGTTGT CCTCCTCCTC GGCGACGGTG
CAGACGTTCG GCTTGACTTC GGAGACCCTC GGCCCCATGG AACTGCGGAC GCTGGCGGAC
TGGGTGATGA CGCCGCGCCT CCTCGCCGTG CCGGGAGTCG CCGACGTCAA TGTCTTCGGT
GGCGCAGTAC AGCAGTTGCA GGTGGAAGTC GATCCCGCAC GGCTCAAGCG CTTCGGTCTC
GACCTCAACG CCGTGAGCCT GGCGGTGCGC CAGTCGTTCC GCACCCAGGG CGCCGGCTTC
GTGGAGAACG AGAACCAGCG TTTGGCCCTT CAGGTCACGG GCCTCCCGCT CGGTCCGGAA
AGCCTCGGCA ACGTCATCCT CAACCGTTCG CCCGGCGCGG TGCTCAAGCT GCGGGACGTC
GGGACGGTCC GTTTCGGGCC CAGGCCGCCG ATCGGCGCGG CCGCGGTCAA TGGCGCCGCC
GGGATCGTCA TGATGGTGAT CGGCCAGTAT GGCGCCAACA CCCTCGAGGT ATCGCGCGGC
GTGGAACGCG GCCTGGCGGA ACTCGCCCCG ATGCTCGCCG CACGAGGCGC GACACTGCAT
CCCAGACTGT TCCGCCCCGC CGACTATATC GAGCGGGCTC TGGACAACCT CGGCGCTCAC
CTGCTGGCGG GCGGGCTGCT GGTGATGGCG GTACTCTACG CCTTCCTGTA TGACCTTCGC
ACCGCTCTGA TCTCGGCAGT GGCGATCCCG CTTTCACTGC TGGGCGCCTT CGTGGTGCTC
CAGGCTTTCG GTGTCAGCCT GAACCTCATG GTGCTGGGAG GACTGGCCAT CGCCTTGGGC
GAAGTCGTCG ACGACGCCAT CATCGACACC GAGAACATCT TCCGGCGACT GCGGGAAAAC
CGCGCCACTG CCGCCCCCCG CCCCGCGCTC ACGGTCGTTT ACGAGGCATC ACTGGAAGTC
CGCGGGTCGG TGGTCTACGC CAGCTTCATC GTGGCCCTAG TATTCCTGCC GCTGCTGGGA
TTGGGCGGCG TCGCCGGCCG TCTGTTCGCG CCGCTCGGCT ACGCCTACAT CATCGCCATC
CTGATCTCGC TGGCGACCGC ACTGACGGTC ACGCCTGCGC TTTGCGTCGC CCTGCTGACA
GGTTCGAAAG AGGCGGCGGA AACGCCGCCG CTGATCCGCT GGCTGCAACC GCTTTATGGA
CGCTGGCTGC GGTGGGCCGC GAGGCAGCCG GCCCGGCTCG CGGCCGGCAG CCTCGCGGCC
TGCCTTCTGG CGACCGCGTT GGCCCCTGGG CTGGGCGGGG ACTTCCTGCC GCACCTGCGC
GAGGGGCACT ACATCGTGCA CACCACGAGC CTGCCCGGCA CCTCGCTGCA GGAATCACTG
CGCCTTGGCG GACTGGTCGT CCGCGAGATC CTGCGGATCC CCGGGGTGGA ATCCGTCTCG
CAATGGGCGG GACGGGCCGA GCGCGGCGCC GATACCTACG GCAGCCATTA CAGCGAATAC
GAGGTGCGCC TCCAACCGAT GTCCGGCAGC GGACAACAGA AGGTGCTGGA GCGGCTGCGC
GGACTACTGG AGGGCTTCCC CGGGATACGG GCCGAGGTGA ACACCTTCCT CACCGAACGG
GTCAACGAAA CGATTTCGGG CTACACCTCG CCGGTCGCAG TCAATCTGTA CGGTGACGAC
CTGGATCTGC TGGACCGGAA GGCGCGCGAG CTCGCCGACG AAATCGGCAG GATGGCTGGA
GCCACGGACG TGCAGCTGCG GTCGCCGCCC GGCTCGCCGC TGGCGGAAAT CCGGCTGCGG
CCCGATCAGC TCCAGGTGTG GGGACTACGT CCGGGAGACG TCATGGATGC CGTCGACACC
GCTTTCGCCG GCCGGACCGT CGGCCACTTC CCCCTCGGCC AGCGTATCGT CGAAACGTCC
GTCATCCTCC GGCCGGATTT GCGGCAGTCG CTCGACAGCC TGCGCGAACT GCCGCTCAAA
AGCCAGGACG GTACGCTCGT ATCCCTCGGC GAGGTGGCCG AAATCTCCGA AACCGGGGAT
CGCTACAACA TCCTGCACCG CGGCGGCCGC CGCATCCAGA CCGTGACCGC TGGCGTCGAG
GGACGCGACC TGGCCTCGTT CGTGGAGGAA TTGCGGGCCC GGTTGGATGC GGTGCTGGGA
CGTTCGACCG GCGTCTATGC GGAAATAACC GGCGCCGCGA TGGAACAGGG CGTCGCCCGG
CGCGAACTGA TCGCCCGCGC CTGCCTGGCT GGCGGCGGCG TGCTGGTGCT CACCTATCTC
GCCATAGGCC GTTTACGCCA TACCGCCATC GTCCTGGCCA ACCTGCCGTT CTCACTGGCT
GGGGGGGTGC TGGCAGCAGG GATTTCCGGC GCCAGCCTTT CGGTGGGCGC GCTGGTAGGT
TTCGTGACTC TGTTCGGCAT CACCGTCCGC AACACCATCA TGCTGCTTTC GCATTACCGT
CATCTGGTCG AGAGGGAAAG GCAGACATGG AATCTCGACA CCGCCGTGCG GGGTGCCCAG
GAACGCCTGC CTTCGATTCT GATGACGGCG CTGGTGACCG CGCTGGCGAT GCTGCCCATC
GCCAGCGGCA GCGACGACCC GGGACTGGAA ATCATGGGAC CGATGGCTGC CATCATCATC
GGCGGCCTGC TGTCTTCCAC CTGCCTCAAT CTCGCGTTGC TGCCGGCAAT GCTGCTGCGC
TGGGGAGGCT CTTTCGAAAA CCGGTAG
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| Protein sequence | MLGALVRFAV CRSGVVIALA VLLAAYGLYR AATAKLDIFP EFSAKRVVVQ TEAPGLTTRQ
VEILLTLPIE RKLAGIVGLE TLRSESIQGL SVVTAVFAEE TDIYRDRQLV SERLALLAGQ
LPEGAGTPVL VPLSSSSATV QTFGLTSETL GPMELRTLAD WVMTPRLLAV PGVADVNVFG
GAVQQLQVEV DPARLKRFGL DLNAVSLAVR QSFRTQGAGF VENENQRLAL QVTGLPLGPE
SLGNVILNRS PGAVLKLRDV GTVRFGPRPP IGAAAVNGAA GIVMMVIGQY GANTLEVSRG
VERGLAELAP MLAARGATLH PRLFRPADYI ERALDNLGAH LLAGGLLVMA VLYAFLYDLR
TALISAVAIP LSLLGAFVVL QAFGVSLNLM VLGGLAIALG EVVDDAIIDT ENIFRRLREN
RATAAPRPAL TVVYEASLEV RGSVVYASFI VALVFLPLLG LGGVAGRLFA PLGYAYIIAI
LISLATALTV TPALCVALLT GSKEAAETPP LIRWLQPLYG RWLRWAARQP ARLAAGSLAA
CLLATALAPG LGGDFLPHLR EGHYIVHTTS LPGTSLQESL RLGGLVVREI LRIPGVESVS
QWAGRAERGA DTYGSHYSEY EVRLQPMSGS GQQKVLERLR GLLEGFPGIR AEVNTFLTER
VNETISGYTS PVAVNLYGDD LDLLDRKARE LADEIGRMAG ATDVQLRSPP GSPLAEIRLR
PDQLQVWGLR PGDVMDAVDT AFAGRTVGHF PLGQRIVETS VILRPDLRQS LDSLRELPLK
SQDGTLVSLG EVAEISETGD RYNILHRGGR RIQTVTAGVE GRDLASFVEE LRARLDAVLG
RSTGVYAEIT GAAMEQGVAR RELIARACLA GGGVLVLTYL AIGRLRHTAI VLANLPFSLA
GGVLAAGISG ASLSVGALVG FVTLFGITVR NTIMLLSHYR HLVERERQTW NLDTAVRGAQ
ERLPSILMTA LVTALAMLPI ASGSDDPGLE IMGPMAAIII GGLLSSTCLN LALLPAMLLR
WGGSFENR
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