Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA0043 |
Symbol | rpiB |
ID | 3103899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 44293 |
End bp | 44721 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637169269 |
Product | ribose 5-phosphate isomerase B |
Protein accession | YP_112583 |
Protein GI | 53802779 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0698] Ribose 5-phosphate isomerase RpiB |
TIGRFAM ID | [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family [TIGR01120] ribose 5-phosphate isomerase B |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAG GCATCGCATC CGATCACGCC GGTTTCGATT ACAAAGAACG GCTCCGTGCC TGGCTCGCTT CGCTCGGCCA TGAGGTCGTC GACTACGGCT GTTTCAGCGA CGAGCGCACC GATTATCCCA CCTGGATACG CCCCTGCGCG CAGGCCGTGG CCGCCGGCGA GGTCGAGCGC GGCATCGTGC TCGGCGGCAG TGGCAATGGC GAGGCCATCG TCGCCAACCG GGTCAAAGGC TGCCGTTGCG GCTACTGCTT CAACGAAGAA ACCGCCTACC TCACCCGTTG GCACAACGAC GCCAACTGCA TCGCCATCGG CCAGCGCATC GTGACTTTGG ACATGGCCAA GAAGATCGTC GAGACCTTTC TCTCGACCGG CTTCGAGGGT GGCCGGCACA TTCCACGGAT CGTGGCGATC GACGCCTAG
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Protein sequence | MKIGIASDHA GFDYKERLRA WLASLGHEVV DYGCFSDERT DYPTWIRPCA QAVAAGEVER GIVLGGSGNG EAIVANRVKG CRCGYCFNEE TAYLTRWHND ANCIAIGQRI VTLDMAKKIV ETFLSTGFEG GRHIPRIVAI DA
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