Gene MCA0027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA0027 
Symbol 
ID3102403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp28538 
End bp29773 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content64% 
IMG OID637169254 
ProductISMca5, transposase 
Protein accessionYP_112568 
Protein GI53802661 
COG category[L] Replication, recombination and repair 
COG ID[COG3328] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0677305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAGCA AGAAGAAACC GGCGGCAGCC GGCATGACGG CGCTGCCGTC TATTCCCCAC 
GAGCTCATTG AACAATTGAC CGGCGGCGCC ACGCCGATGA CGGCCGAACA GATCAACGCC
ACCACCATGG CGCTGAAGAA AGCGCTGATC GAGCGTGCGC TGGGCGCAGA GCTGTCGTAC
CACCTGGGCT ATCCGCCCGG CAGCGCCCGC CCCGAGGATG CAGCCAACCA GCGCAACGGC
AAGTCCGCCA AGACGGTGCT GACTCAGGAC GGGCCGCTGC GCATCGAGGT GCCGCGCGAC
CGCGCAGGCT CCTTCGAGCC CATCCTGATC CCCAAGCACG AGCGGCGTTT CACGGGCTTT
GACGACAAGA TCGTGGCCAT GTACGCGCGG GGCATGACCG TGCGTGAGAT CCAGGGCTTC
CTGGCTGAGC AGTACGGCAC CGAGGTCAGT CCTGAATTCA TCAGTTGTGT CACGGATGAG
GTGATGGCCG AGGTCACCGC CTGGCAGGGC AGGCCGTTGG AGCCGATGTA CCCGGTCGTA
TTCTTCGACT GTCTGCGGGT CAAGATCCGC GAGGATGCCG TGGTGCGCAA CAAGGCCATC
TATCTGGCGC TGGGCGTGCT GCCCGACGGT ACGCGCGACA TCCTGGGCCT GTGGATCGAG
AACACCGAAG GGGCCAAGTT CTGGATGAAG GTGTTCAACG ATCTGAAGAC GCGCGGCGTG
GCCGACATCC TGATTGCCGT CACCGACGGG CTCAAGGGCA TTCCCGAGGC GCTTGGGGCG
GTGTTTCCGG CCACGACGCT GCAGACCTGT ATCGTGCACT TGATCCGCAA CAGCCTGGAC
TATGCCAGCT GGAAGGACCG CAAAGCGCTG GCTGCGGCGC TCAAGCCCAT CTACACGGCG
CCCAGCGCAG AAGCCGCAGC GGTCGAACTC GATGCCCTGG AGGCTGGCCC CTGGGGGCAG
AAGTTCCCCA CGGTGGTGGC GACCTGGCGC CGGGCCTGGG ACCGCGTCAT TCCGTTTTTT
GCGTTCAGCC CGGCGGTGCG CAGAGTGATC TACACGACCA ATGCCATCGA GAGCCTGCAC
AGTCAGCTGC GCAAGATCAT CAAGACGCGG GGGCACTTTC CCAATGACGA GGCCGCCACC
AAGCTGCTGT GGCTGGCCTT GCGCAACATC ACGGCTGACT GGGGCCGAGC AGCCAGGGAG
TGGAAAGACG CCATGAACCA GTTCGCCATC GCCTAG
 
Protein sequence
MPSKKKPAAA GMTALPSIPH ELIEQLTGGA TPMTAEQINA TTMALKKALI ERALGAELSY 
HLGYPPGSAR PEDAANQRNG KSAKTVLTQD GPLRIEVPRD RAGSFEPILI PKHERRFTGF
DDKIVAMYAR GMTVREIQGF LAEQYGTEVS PEFISCVTDE VMAEVTAWQG RPLEPMYPVV
FFDCLRVKIR EDAVVRNKAI YLALGVLPDG TRDILGLWIE NTEGAKFWMK VFNDLKTRGV
ADILIAVTDG LKGIPEALGA VFPATTLQTC IVHLIRNSLD YASWKDRKAL AAALKPIYTA
PSAEAAAVEL DALEAGPWGQ KFPTVVATWR RAWDRVIPFF AFSPAVRRVI YTTNAIESLH
SQLRKIIKTR GHFPNDEAAT KLLWLALRNI TADWGRAARE WKDAMNQFAI A