| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA0024 |
|---|
| Symbol | pgl-1 |
|---|
| ID | 3103654 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | - |
|---|
| Start bp | 23287 |
|---|
| End bp | 23994 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637169251 |
|---|
| Product | 6-phosphogluconolactonase |
|---|
| Protein accession | YP_112565 |
|---|
| Protein GI | 53802664 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase |
|---|
| TIGRFAM ID | [TIGR01198] 6-phosphogluconolactonase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.77828 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGA TCCGATGGTT CGACGACAAC ACGAGCTTGG CGCCGGCGCT GGCCGCGGCG
GTGGCGGAGG ATGTGCGCGC CGCGTTGGCG ACCGATCCCG CGGCTATTTT GGCCGTTTCG
GGCGGCCGCT CGCCGGTACC GGTGTTCGAG GCCTTGCGCG AAGCCGATTT GGACTGGGCA
CGGGTCATCG TCACCCTGGT CGACGAACGC TGGGTGCCGG AAACCGATCC CGCCAGCAAC
GCCGCCCTGG TGAAGACCCA TTTGCTGCAG GGCAAGGCGG CGGCGGCCCG CTTCCTGCCG
CTGTACACCG GGGACGCTTC CGCCGCCGCA GCCGAAACCC GCCTGGCCCG GTCCTTCGCC
GAGCTGCCAC GGCCATTCGC GGCGCTGATC CTGGGCATGG GCGACGATGG CCATACCGCC
TCGCTGTTCC CGGCCAGCCC CAACCTGGAG GCCGGTCTGG CGCTGGGCGG CACGGTCGAG
AATACCCCGC CCTGTCTGGC TCAGGTGGGC GCGATCGCGC CGACCGAACG CGTCAGCCTC
ACCCTGCCCT GGATCCTCGA CGCCCGGCAT ATCTACCTGC AGTTCGGCGG AGCGGGCAAG
GTGGAGGTGT TCAACGCCGC CCTGGCCGGC CCCAACCGGC AATATCCCGT GAGTTTCGTG
CTGGCCCAGA CGCGGACCCC GGTCACCGTG TTCGCGGCGC GGAGTTGA
|
|---|
| Protein sequence | MTEIRWFDDN TSLAPALAAA VAEDVRAALA TDPAAILAVS GGRSPVPVFE ALREADLDWA
RVIVTLVDER WVPETDPASN AALVKTHLLQ GKAAAARFLP LYTGDASAAA AETRLARSFA
ELPRPFAALI LGMGDDGHTA SLFPASPNLE AGLALGGTVE NTPPCLAQVG AIAPTERVSL
TLPWILDARH IYLQFGGAGK VEVFNAALAG PNRQYPVSFV LAQTRTPVTV FAARS
|
|---|
| |