Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA0010 |
Symbol | atpA-1 |
ID | 3104176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 6842 |
End bp | 8383 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637169237 |
Product | F0F1 ATP synthase subunit alpha |
Protein accession | YP_112551 |
Protein GI | 53802693 |
COG category | [C] Energy production and conversion |
COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.768352 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACTGA ACGCGTCTGA AATCAGTGAT CTCATCAAGC AGAGGATCGG AAAGTTCGAT CTGGGCGTTG AGTCACGCAG TGAAGGAACC ATCGTCAGCC TGACCGACGG CATCGTCCGC ATCCATGGCC TCCAGGACGT GATGCAAGGG GAAATGGTGG AGTTTCCGGG CAATACCTAC GGCATGGCGC TCAACCTGGA ACGCGATTCC GTCGGTGCCG TGGTGCTCGG TTCCTATGAG CACCTTTCCG AAGGCGACAC CGCCAAATGC ACCGGGCGCA TTCTGGAAGT GCCGGTGGGT GAAGCGCTGC TCGGCCGCGT GGTCGACGCG CTGGGCAATC CGATCGACGG CGCCGGCCCG ATCGATGCGA AGCTGTTCTC GCCGATCGAG AAGATCGCCC CGGGTGTCAT TTCGCGCCAG TCGGTGAGCC AGCCGCTGCA GACCGGCCTC AAGGCCATCG ACTCGATGAT CCCGGTGGGC CGGGGCCAGC GCGAGCTGAT CATCGGTGAC CGTCAGACCG GAAAGACCGC CATCGCGATC GACGCCATCA TCAACCAGAA GGGCACCGGG GTTAAGTGCA TCTATGTCGC CGTCGGCCAG AAGCAGTCGT CGATCGCCAA CGTGGTGCGC AAGCTGCAGG AACACGGCGC GATGGAGCAC ACCATCGTCG TGTCGGCCTC GGCCTCCGAA TCCGCGGCGC TGCAGTTCAT CGCCCCTTAT GCCGGTTGCG CGATGGGCGA ATATTTCCGC GACCGCGGCG AAGATGCGCT CATCGTCTAT GACGACCTCA CCAAGCAGGC CTGGGCCTAC CGTCAGATCT CGCTGCTGCT GCGGCGTCCC CCAGGGCGCG AAGCCTATCC GGGCGACGTG TTCTACCTGC ATTCGCGCCT GTTGGAACGG GCTTCGCGGA TCAATGCGGA AGAAGTCGAG CGTCTCACCA AGGGCGAGGT GAAAGGCAAG ACCGGTTCGT TGACCGCCCT GCCCATCATC GAAACCCAGG CCGGTGACGT TTCCGCCTTC GTGCCGACCA ACGTGATCTC GATCACCGAT GGCCAGATTT TCCTGGAAAC CAACCTGTTC AACGCAGGCA TCCGCCCGGC CGTGAACGCC GGTCTGTCGG TGTCGCGTGT GGGCGGCGCG GCCCAGACCA AGGTGATCAA GAAGCTCGGC GGCGGCATCC GTCTCGACCT CGCCCAGTAC CGCGAGCTCG CGGCATTCGC CCAGTTCGCG TCCGACTTGG ACGAGGCGAC CCGTAAGCAG ATCGAGCGTG GCCAGCGGGT CACCGAGCTG ATGAAGCAGA ACCAGTATTC GCCGATGAGC ATCGCCCAGA TGGCCGTCTC CCTGTTCGCC GCCAACGAGG GATATCTGGA TGACATCGAG GTCAGCAAGG TGCGTGACTT CGAGGATGCC CTACAGGAGT ACATGAAGTC GCAGTGTGCC GAACTGCTGA AGTCGATCGA CGCCACCGGC GATTACAACG ACGCGATCCA GGCCGGCTTG CACGAAGCGA TCAAGAAGTT CAAAGCGACT CACGCCTGGT GA
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Protein sequence | MQLNASEISD LIKQRIGKFD LGVESRSEGT IVSLTDGIVR IHGLQDVMQG EMVEFPGNTY GMALNLERDS VGAVVLGSYE HLSEGDTAKC TGRILEVPVG EALLGRVVDA LGNPIDGAGP IDAKLFSPIE KIAPGVISRQ SVSQPLQTGL KAIDSMIPVG RGQRELIIGD RQTGKTAIAI DAIINQKGTG VKCIYVAVGQ KQSSIANVVR KLQEHGAMEH TIVVSASASE SAALQFIAPY AGCAMGEYFR DRGEDALIVY DDLTKQAWAY RQISLLLRRP PGREAYPGDV FYLHSRLLER ASRINAEEVE RLTKGEVKGK TGSLTALPII ETQAGDVSAF VPTNVISITD GQIFLETNLF NAGIRPAVNA GLSVSRVGGA AQTKVIKKLG GGIRLDLAQY RELAAFAQFA SDLDEATRKQ IERGQRVTEL MKQNQYSPMS IAQMAVSLFA ANEGYLDDIE VSKVRDFEDA LQEYMKSQCA ELLKSIDATG DYNDAIQAGL HEAIKKFKAT HAW
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