Gene MCA0009 details

Gene Information

• Locus tag: MCA0009
• Symbol: atpH
• ID: 3103811
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 6290
• End bp: 6826
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637169236
• Product: ATP synthase F1, delta subunit
• Protein accession: YP_112550
• Protein GI: 53802694
• COG category: [C] Energy production and conversion
• COG ID: [COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)
• TIGRFAM ID: [TIGR01145] ATP synthase, F1 delta subunit

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGAAC TGACCACCCT GGCTCGGCCC TACGCCGTCG CCGTATTCAA AGCGGCCAAG 
GAAGCCGGCA ACATCCAGGA ATGGGCCGAC ATGCTCGAAT TCCTCAAGCA GGTCATGGCC 
GATCCCCTCA TGCAACGGGC CGCCAGTGAT CCGAAGGCAG GCAAAGACAG GTTCATCGCC 
AAATTCTTGG ATCTCTGCAA AGGTCACGTC ATCCCGGAAG GCGAGAATTT CATTCGTCTC 
CTGGCGAGCA ATGGCCGCCT GGGGCTGGTC GGGACGATCG CCGACATGTT CGCCGAGTTC 
CGGGCGGAAG AGGAAGGTTA CGTCGATGTC GATGTCATTA CCGCTTACCC GCTCGAAGAG 
AGCGAAACAA CGAATCTCAA TGCGTTGGTG GAAAAGTGGA TGTCGCGTAA GGGGCGCCTT 
CACGTCACCG TGGATGAATC CCTGATCGCC GGCGTGGTTC TTCGCGCCGG TGGCCGGGTC 
GTCGATGCTT CCGTCCATGG CCAGCTCCAG CGATTGGCGA AACGACTCTC CAATTAG 

 

Protein sequence

MSELTTLARP YAVAVFKAAK EAGNIQEWAD MLEFLKQVMA DPLMQRAASD PKAGKDRFIA 
KFLDLCKGHV IPEGENFIRL LASNGRLGLV GTIADMFAEF RAEEEGYVDV DVITAYPLEE 
SETTNLNALV EKWMSRKGRL HVTVDESLIA GVVLRAGGRV VDASVHGQLQ RLAKRLSN