Gene SERP2550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP2550 
SymbolrecF 
ID3242533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp2611754 
End bp2612869 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content35% 
IMG OID637169224 
Productrecombination protein F 
Protein accessionYP_190091 
Protein GI57865928 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0191996 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTTA ATACACTCCA ATTAGAGAAT TATCGTAACT ATGAACAGGT GACATTAGAT 
TGTCATCCCG AAGTGAATAT CCTTATTGGT GAGAACGCAC AAGGAAAGAC AAATTTACTT
GAATCAATTT ATACCTTAGC GCTTGCTAAA AGTCATCGTA CGTCAAATGA TAAGGAACTC
ATACGTTTCA AGTCTGATTA TGCTAAAATA GAGGGTGAGC TAAGTTATAG ACATGGTACG
ATGCCGCTTA CGATGTTTAT AACTAAAAAA GGTAAGCAAG TTAAAGTAAA TCATCTTGAG
CAAAGCAGAC TAACTCAATA TATTGGACAT TTAAATGTCG TCTTATTTGC GCCTGAAGAT
TTAAATATCG TTAAAGGTTC ACCACAAATA CGTCGACGAT TCATAGATAT GGAGTTAGGA
CAAATATCTG CTGTCTATTT GAATGATTTA GCTCAATATC AGCGTATTCT AAAGCAAAAG
AACAATTACC TTAAACAGTT ACAAATTGGG CAGAAGACAG ATACAACAAT GTTAGAAGTC
TTAAACCAAC AATTTGCTGA ATATGCACTG AAGGTTACGT TACGTCGAGA GCACTTTATA
AAGGAATTAG AAACACTTGC ACAACCCATT CATGCAGGTA TCACAAATGA TCGAGAGACA
CTGACACTCG ATTATGTTCC AAGTTTGAAG TTAAGTAATT ATGAAGCCAA TCAATCTGAG
TTAATTGAAG AAGTATTAGC ATTGTTAAAT GACAATTTAC AAAGAGAAAA AGAACGAGGC
GTATGTCTCT ATGGCCCACA TCGTGATGAC TTAAGTTTCA ATGTAAATGG CATGGATGCT
CAAACGTATG GTTCACAAGG TCAGCAACGT ACAACTGCGC TGTCAATTAA GTTGGCAGAA
ATTGAATTAA TGAATATTGA AGTAGGAGAA TATCCAATCT TACTTTTAGA TGATGTCTTG
AGTGAGCTTG ATGATTCACG TCAAACACAT TTGTTAAGTA CGATTCAACA TAAAGTACAA
ACATTTGTGA CAACTACGTC AGTTGAAGGA ATAGATCATG AAATAATGAA TAACGCTAAG
TTATACCGTA TTAGTCAAGG TGAAATACTA AAGTAA
 
Protein sequence
MKLNTLQLEN YRNYEQVTLD CHPEVNILIG ENAQGKTNLL ESIYTLALAK SHRTSNDKEL 
IRFKSDYAKI EGELSYRHGT MPLTMFITKK GKQVKVNHLE QSRLTQYIGH LNVVLFAPED
LNIVKGSPQI RRRFIDMELG QISAVYLNDL AQYQRILKQK NNYLKQLQIG QKTDTTMLEV
LNQQFAEYAL KVTLRREHFI KELETLAQPI HAGITNDRET LTLDYVPSLK LSNYEANQSE
LIEEVLALLN DNLQREKERG VCLYGPHRDD LSFNVNGMDA QTYGSQGQQR TTALSIKLAE
IELMNIEVGE YPILLLDDVL SELDDSRQTH LLSTIQHKVQ TFVTTTSVEG IDHEIMNNAK
LYRISQGEIL K