Gene SERP2549 details

Gene Information

• Locus tag: SERP2549
• Symbol: gyrB
• ID: 3242532
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Staphylococcus epidermidis RP62A
• Kingdom: Bacteria
• Replicon accession: NC_002976
• Strand: -
• Start bp: 2609812
• End bp: 2611743
• Gene Length: 1932 bp
• Protein Length: 643 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 637169223
• Product: DNA gyrase, B subunit
• Protein accession: YP_190090
• Protein GI: 57865927
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
• TIGRFAM ID: [TIGR01059] DNA gyrase, B subunit

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGAATA CATTGTCAGA TGTAAACAAC ACAGATAATT ATGGTGCTGG ACAGATACAA 
GTTTTAGAAG GTCTCGAAGC GGTTCGTAAA AGACCGGGTA TGTATATTGG TTCAACTTCA 
GAAAGAGGGT TGCACCATTT AGTATGGGAA ATTGTTGATA ATAGTATTGA CGAGGCATTA 
GCAGGTTATG CTAGTCATAT TGAAGTTGTA ATTGAGAAAG ACAATTGGAT TAAAGTTACT 
GACAATGGCC GTGGTATTCC TGTTGATATT CAAGAAAAGA TGGGACGCCC TGCTGTCGAA 
GTTATCTTAA CTGTACTTCA CGCTGGAGGT AAATTCGGAG GTGGCGGATA CAAAGTATCT 
GGCGGTCTTC ACGGTGTTGG ATCTTCAGTT GTTAATGCAC TCTCACAAGA TCTTGAAGTT 
TATGTACATC GTAATGGCAC GATTTATCAT CAAGCCTATA AACAAGGTGT GCCACAATTT 
GATCTTAAAG AAATTGGCGA TACAGATAAA ACAGGTACAG CTATTCGATT CAAAGCCGAT 
AAAGAAATCT TTACAGAGAC AACAGTTTAT AACTATGAAA CACTTCAAAA GCGTATACGT 
GAGCTTGCTT TCTTAAATAA AGGTATTCAA ATTACTTTAA AAGATGAAAG AGAAGAGGAA 
GTTAGAGAAG ACTCATATCA TTATGAAGGC GGGATTAAAT CCTATGTAGA TTTATTAAAT 
GAGAATAAAG AACCTCTTCA CGATGAACCT ATATATATCC ATCAGTCTAA AGACGATATT 
GAAGTGGAAA TTGCACTTCA ATATAACAGT GGATATGCAA CCAACTTATT AACGTATGCG 
AATAATATTC ATACATACGA GGGTGGTACG CATGAAGATG GCTTTAAACG TGCTTTAACA 
CGCGTTTTAA ATAGCTATGG TACGCAAAGT AAGATTATTA AAGAGGATAA AGATAGACTT 
TCAGGTGAAG ATACACGAGA AGGTTTAACA GCAGTCGTAT CAATTAAACA TGGCGATCCT 
CAGTTTGAAG GACAAACAAA AACAAAATTA GGAAACTCTG AAGTACGTCA AGTTGTTGAT 
AGATTATTTT CTGAACACTT TGAACGTTTC TTATATGAGA ATCCATCTGT AGGACGCATT 
ATTGTTGAAA AGGGTATTAT GGCTTCACGC GCACGTGTGG CTGCCAAAAA AGCACGTGAA 
GTTACGCGTC GTAAATCAGC ATTAGACGTT TCAAGCTTAC CAGGTAAATT GGCAGATTGT 
TCTAGTAAGA ACCCTGAAGA AAGTGAAATT TTCTTGGTAG AAGGTGACTC TGCCGGGGGG 
TCTACTAAAT CTGGTCGTGA TTCAAGAACA CAAGCCATTT TACCTTTAAG AGGTAAAATT 
TTGAATGTGG AAAAAGCACG TTTAGATCGT ATCTTAAACA ATAACGAAAT TCGTCAAATG 
ATTACTGCAT TTGGTACGGG TATTGGAGGA GAATTCGATA TATCAAAAGC ACGTTATCAT 
AAAATCGTAA TCATGACTGA TGCCGATGTT GATGGTGCAC ATATACGTAC GTTATTACTT 
ACATTCTTCT ATCGTTTCAT GAGACCTTTA ATTGAAGCGG GCTACGTTTA TATTGCTCAG 
CCGCCTTTAT ATAAACTAAC ACAAGGAAAA CAAAAATATT ATGTATTTAA CGATAGAGAA 
CTAGACAAGT TGAAACAAGA ATTAAACCCG TCACCAAAAT GGTCAATTGC ACGTTACAAA 
GGTCTTGGTG AAATGAACGC AGACCAATTA TGGGAAACGA CTATGAATCC TGAACATCGC 
TCTATGTTGC AAGTGAGACT TGAAGATGCA ATTGATGCAG ACCAAACATT TGAAATGTTA 
ATGGGCGATG TAGTAGAAAA TCGCAGACAA TTTATCGAAG ACAATGCAGT TTATGCCAAC 
CTAGATTTCT AG 

 

Protein sequence

MVNTLSDVNN TDNYGAGQIQ VLEGLEAVRK RPGMYIGSTS ERGLHHLVWE IVDNSIDEAL 
AGYASHIEVV IEKDNWIKVT DNGRGIPVDI QEKMGRPAVE VILTVLHAGG KFGGGGYKVS 
GGLHGVGSSV VNALSQDLEV YVHRNGTIYH QAYKQGVPQF DLKEIGDTDK TGTAIRFKAD 
KEIFTETTVY NYETLQKRIR ELAFLNKGIQ ITLKDEREEE VREDSYHYEG GIKSYVDLLN 
ENKEPLHDEP IYIHQSKDDI EVEIALQYNS GYATNLLTYA NNIHTYEGGT HEDGFKRALT 
RVLNSYGTQS KIIKEDKDRL SGEDTREGLT AVVSIKHGDP QFEGQTKTKL GNSEVRQVVD 
RLFSEHFERF LYENPSVGRI IVEKGIMASR ARVAAKKARE VTRRKSALDV SSLPGKLADC 
SSKNPEESEI FLVEGDSAGG STKSGRDSRT QAILPLRGKI LNVEKARLDR ILNNNEIRQM 
ITAFGTGIGG EFDISKARYH KIVIMTDADV DGAHIRTLLL TFFYRFMRPL IEAGYVYIAQ 
PPLYKLTQGK QKYYVFNDRE LDKLKQELNP SPKWSIARYK GLGEMNADQL WETTMNPEHR 
SMLQVRLEDA IDADQTFEML MGDVVENRRQ FIEDNAVYAN LDF