| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP2528 |
|---|
| Symbol | |
|---|
| ID | 3240729 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | - |
|---|
| Start bp | 2582598 |
|---|
| End bp | 2583893 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 637169200 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_190069 |
|---|
| Protein GI | 57865890 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000000441271 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGACATA ATATATTTTA TAATAGGAGG GAATTTCAAA TGATAGACAA CTTTATGCAG
GTCCTTAAAT TAATTAAAGA GAAACGTACC AATAATGTAG TTAAAAAATC TGATTGGGAT
AAAGGTGATC TATATAAAAC TTTAGTCCAT GATAAGTTAC CCAAGCAGTT AAAAGTGCAT
ATAAAAGAAG ATAAATATTC AGTTGTAGGG AAGGTTGCTA CTGGGAACTA TAGTAAAGTT
CCTTGGATTT CAATATATGA TGAGAATATA ACAAAAGAAA CAAAGGATGG ATATTATTTG
GTATATCTTT TTCATCCGGA AGGAGAAGGC ATATACTTAT CTTTGAATCA AGGATGGTCA
AAGATAAGTG ATATGTTTCC GCGGGATAAA AATGCTGCAA AACAAAGAGC ATTAACTTTA
TCTTCCGAAC TCAATAAATA TATTACATCA AATGAATTTA ATACTGGAAG ATTTTATTAC
GCAGAAAATA AAGATTCATC TTATGATTTA AAAAATGATT ATCCATCAGG ATATTCTCAT
GGATCAATAA GATTCAAATA TTATGATTTG AATGAAGGAT TCACAGAAGA AGATATGCTA
GAGGATTTAA AGAAATTTTT AGAACTATTT AATGAATTAG CTTCAAAAGT TACAAAAACA
TCCTATGATA GCTTGGTCAA TAGCATAGAC GAAATACAGG AAGACAGCGA AATTGAAGAA
ATTAGAACAG CACAAAAAGA TAAGACACTC AAGGAAGTGG AAGCACCTAA AGGAATAATT
CCAAAATATA AAAAAGGTGT ATCAAAGACT ACTAAAAATG ATTCAGAAAT TGAAAAATCA
AATAAAGAGA ATAAATTAAC CGGTAAAGTT GGAGAAAAAT TAGCGCTAAA TTACTTTAAT
GAGCTAATTG ATAATAAAAT AGACGAAGAT AAGAAAGAAC AGTTTAGGAA TATTTTAAAT
GATAATCCAG GCTCTCAACA CGGTCATGGC TATGATTTAG TAGCTTTTGA TCCAACAAAT
ACAGATAAAG CTGTAGAAAA ATTTATTGAA ATTAAAACAT CTACATCTTC TAGTATTGAG
GAACCATTTT TTATGTCGCT AAATGAAATG TTTGCTATGA AAGAATATAA GCAGAAATAT
TTAATATTAA GAATATTTAA TGTTTCCGGT AAAGAACCAC AATTTTATTT TATAGATCCA
TATGCAAATT ATTCTGAATT TAAAGATGTA GATGATCTCA TTGACAAAGT ATTTAATGTA
GAAGCTATTC AGTATAAAGT TTTTGGCGAA AAATGA
|
|---|
| Protein sequence | MRHNIFYNRR EFQMIDNFMQ VLKLIKEKRT NNVVKKSDWD KGDLYKTLVH DKLPKQLKVH
IKEDKYSVVG KVATGNYSKV PWISIYDENI TKETKDGYYL VYLFHPEGEG IYLSLNQGWS
KISDMFPRDK NAAKQRALTL SSELNKYITS NEFNTGRFYY AENKDSSYDL KNDYPSGYSH
GSIRFKYYDL NEGFTEEDML EDLKKFLELF NELASKVTKT SYDSLVNSID EIQEDSEIEE
IRTAQKDKTL KEVEAPKGII PKYKKGVSKT TKNDSEIEKS NKENKLTGKV GEKLALNYFN
ELIDNKIDED KKEQFRNILN DNPGSQHGHG YDLVAFDPTN TDKAVEKFIE IKTSTSSSIE
EPFFMSLNEM FAMKEYKQKY LILRIFNVSG KEPQFYFIDP YANYSEFKDV DDLIDKVFNV
EAIQYKVFGE K
|
|---|
| |