| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP2520 |
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| Symbol | mecR1 |
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| ID | 3242262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | - |
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| Start bp | 2574799 |
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| End bp | 2576556 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 637169192 |
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| Product | methicillin-resistance regulatory protein MecR1 |
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| Protein accession | YP_190061 |
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| Protein GI | 57865867 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4219] Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00119182 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTATCAT CTTTTTTAAT GTTAAGTATA ATCAGTTCAT TGCTCACGAT ATGTGTAATT
TTTTTAGTGA GAATGCTCTA TATAAAATAT ACTCAAAATA TTATGTCACA TAAGATTTGG
TTATTAGTGC TCGTCTCCAC GTTAATTCCA TTAATACCAT TTTACAAAAT ATCGAATTTT
ACATTTTCAA AAGATATGAT GAATCGAAAT GTATCTGACA CGACTTCTTC GGTTAGTCAT
ATGTTAGATG GTCAACAATC ATCTGTTACG AAAGACTTAG CAATTAATGT TAATCAGTTT
GAGACCTCAA ATATAACGTA TATGATTCTT TTGATATGGG TATTTGGTAG TTTGTTGTGC
TTATTTTATA TGATTAAGGC ATTCCGACAA ATTGATGTTA TTAAAAGTTC GTCATTGGAA
TCGTCATATC TTAATGAACG ACTTAAAGTA TGTCAAAGTA AGATGCAGTT CTACAAAAAG
CATATAACAA TTAGTTATAG TTCAAACATT GATAATCCGA TGGTATTTGG TTTAGTGAAA
TCCCAAATTG TACTACCAAC TGTCGTAGTC GAAACCATGA ATGACAAAGA AATTGAATAT
ATTATTCTAC ATGAACTATC ACATGTGAAA AGTCATGACT TAATATTCAA CCAGCTTTAT
GTTGTTTTTA AAATGATATT CTGGTTTAAT CCTGCACTAT ATATAAGTAA AACAATGATG
GACAATGACT GTGAAAAAGT ATGTGATAGA AACGTTTTAA AAATTTTGAA TCGCCATGAA
CATATACGTT ATGGTGAATC GATATTAAAA TGCTCTATTT TAAAATCTCA GCACATAAAT
AATGTGGCAG CACAATATTT ACTAGGTTTT AATTCAAATA TTAAAGAACG TGTTAAGTAT
ATTGCACTTT ATGATTCAAT GCCTAAACCT AATCGAAACA AGCGTATTGT TGCGTATATT
GTATGTAGTA TATCGCTTTT AATACAAGCA CCGTTACTAT CTGCACATGT TCAACAAGAC
AAATATGAAA CAAATGTATC ATATAAAAAA TTAAATCAAC TAGCTCCGTA TTTCAAAGGA
TTTGATGGAA GTTTTGTGCT TTATAATGAA CGGGAGCAAG CTTATTCTAT TTATAATGAA
CCAGAAAGTA AACAACGATA TTCACCTAAT TCTACTTACA AAATTTATTT AGCGTTAATG
GCATTCGACC AAAATTTACT CTCATTAAAT CATACTGAAC AACAATGGGA TAAACATCAA
TATCCATTTA AAGAATGGAA CCAAGATCAA AATTTAAATT CTTCAATGAA ATATTCAGTA
AATTGGTATT ACGAAAATTT AAACAAACAT TTAAGACAAG ATGAGGTTAA ATCTTATTTA
GATCTAATTG AATATGGTAA TGAAGAAATA TCAGGGAATG AAAATTATTG GAATGAATCT
TCATTAAAAA TTTCTGCAAT AGAACAGGTT AATTTGTTGA AAAATATGAA ACAACATAAC
ATGCATTTTG ATAATAAGGC TATTGAAAAA GTTGAAAATA GTATGACTTT GAAACAAAAA
GATACTTATA AATATGTAGG TAAAACTGGA ACAGGAATCG TGAATCACAA AGAAGCAAAT
GGATGGTTCG TAGGTTATGT TGAAACGAAA GATAATACGT ATTATTTTGC TACACATTTA
AAAGGCGAAG ACAATGCGAA TGGCGAAAAA GCACAACAAA TTTCTGAGCG TATTTTAAAA
GAAATGGAGT TAATATAA
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| Protein sequence | MLSSFLMLSI ISSLLTICVI FLVRMLYIKY TQNIMSHKIW LLVLVSTLIP LIPFYKISNF
TFSKDMMNRN VSDTTSSVSH MLDGQQSSVT KDLAINVNQF ETSNITYMIL LIWVFGSLLC
LFYMIKAFRQ IDVIKSSSLE SSYLNERLKV CQSKMQFYKK HITISYSSNI DNPMVFGLVK
SQIVLPTVVV ETMNDKEIEY IILHELSHVK SHDLIFNQLY VVFKMIFWFN PALYISKTMM
DNDCEKVCDR NVLKILNRHE HIRYGESILK CSILKSQHIN NVAAQYLLGF NSNIKERVKY
IALYDSMPKP NRNKRIVAYI VCSISLLIQA PLLSAHVQQD KYETNVSYKK LNQLAPYFKG
FDGSFVLYNE REQAYSIYNE PESKQRYSPN STYKIYLALM AFDQNLLSLN HTEQQWDKHQ
YPFKEWNQDQ NLNSSMKYSV NWYYENLNKH LRQDEVKSYL DLIEYGNEEI SGNENYWNES
SLKISAIEQV NLLKNMKQHN MHFDNKAIEK VENSMTLKQK DTYKYVGKTG TGIVNHKEAN
GWFVGYVETK DNTYYFATHL KGEDNANGEK AQQISERILK EMELI
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