Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP2475 |
Symbol | |
ID | 3242317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 2530339 |
End bp | 2532159 |
Gene Length | 1821 bp |
Protein Length | 606 aa |
Translation table | 11 |
GC content | 23% |
IMG OID | 637169149 |
Product | hypothetical protein |
Protein accession | YP_190018 |
Protein GI | 57865915 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00968611 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGGAAAT TATACAATTT AAAAGAATTT TTAAATATTT ATTCAACTGA AGATATAGGT TTAATTAATA CATATATCGA ATCTGATAAT AGACCACTTA AAGAAAATGA AGTAGAGGAT TTAAAATCAT TAATAAATCT CTTGAAGCTA AATTATAAAA GTTGTGAAGG TTTTTTTCTT AGTTATGAAG TGCCTCATAT CGGTCACGAA ATAGACTTAT TGAAAGTTAC GAATAATGCT ATTTTAAATA TCGAATTAAA AAGTAGATCT GAGCTTGCAA AGATAAATAA ACAACAAAAG TATAATTATT TTTATCTTAA TACACTTAAC AAAAATGTAG ACATTATAAC CTATAATAGA CATGAAGAAA AGTTTTATAA ATATTGTCAA GAAAGTGAGA AATCACTTGA AATAAATATA GATAAAGTAA GGGATAAAAT TTTTGAATAT GGAAATAAAG AGTTTATTTC AGATATTGAT TATTTATTTA AACCTTCTAA TTTCCTTATT TCACCTTTTA ATGATACTGA CAAATTTCTT GAAGACAAAT ATTATTTAAC GGCCCAGCAA GAAAAAATAA AAAAAGACAT TATAAATCAT AATGGGACTA TTGCTATTAT TGAAGGAAGA CCAGGCACAG GTAAATCACT TTTATTATAT GATATTGCTA AAAAACTAAA AAAAGAGTTT AATATATTAA TAATACATTG TGCATTGTTA AATGAAGGAC ACGAATTAAT GATTAATAAA AATTGGAATA TAAAAAGTGC TCATAAAAAT TGGGTATACA ATGAAGAGAA TTATGAAGGT AAAAATTATA TTTTTATTGA TGAATCACAT AGGTTTTACC CTAATCAATT TGAGTATGTA ATAGAAACTG CACTTAAAAA AGATATTAAG ATAATAACAA CTATAGACCC ATTACAGTAT CTAAGAGATA ATGAAAATGA TTTTGAAAAC TTACAGAGAT TAAAATCTCA TTCTAACATC TATTATAAAA AAATCGATAA TAAAATTAGA TCTAATCCAG AAATATCATC ATTTGTTAAA AGTATTATTA ATTTAAGAAA TATACCTGAA TATAAATTTG AAAATATTTC AATAGAATAT TTGTCAAAAG AAGATGATTG GGAATCATAT TTGCTAAATT TACGTGATAG AGGGTGGACA TATTTACCTT ATACGAAAAG TAGAGATAAT ATTAGTTATC ATAAATATTG TTCGGCTAAT ACTCATTTAA ATACTCATAG AATTATTGGG CAAGAATTTA ATAAAGTTAT TGTTATTTTA GATGAAGGAT TTAAATATGT TGATGGATAC TTAGGATATT ATGGAGATTA TTATTATAAT CCTAGACAAA TGTTGTTTCA AAATTTAACT AGAGCTAGAG AAAAAATAAA AATTATAATC ATTAATAATA CAGATTTATA TAAAAAGATT AAGCAAGTGT TAACTAAGTC TTCTAATAAA AATGAGTTAT CACTTAAATT TTTTATTCCT GAACTTAATA ATGATAAATT AAAATCATTC TATAGTGATA TTTTAGGTTT TAAGTTAATT AGTAATCAAA AACAACCGCC TGGAAAAAGA AAGATAAGCT TTCAAATAGG TGAAACAAAT TTAGGGTTTT ATGAAAAAGA AGATATTTCT AAAAACAATA AATGCGAAAT CAATATAGTT GTAAGTAATT TGAAAGATTT AAAGAAAAGA ATATCAAATG AAAATATGGT ATTGATTAAT GAAGAAGAAG GTAAAAAAAA TAAATTTGTT ACTTTAAATG ATCCATTAAA CAACTATTTA AAGTTAATAG AGTATATATA A
|
Protein sequence | MRKLYNLKEF LNIYSTEDIG LINTYIESDN RPLKENEVED LKSLINLLKL NYKSCEGFFL SYEVPHIGHE IDLLKVTNNA ILNIELKSRS ELAKINKQQK YNYFYLNTLN KNVDIITYNR HEEKFYKYCQ ESEKSLEINI DKVRDKIFEY GNKEFISDID YLFKPSNFLI SPFNDTDKFL EDKYYLTAQQ EKIKKDIINH NGTIAIIEGR PGTGKSLLLY DIAKKLKKEF NILIIHCALL NEGHELMINK NWNIKSAHKN WVYNEENYEG KNYIFIDESH RFYPNQFEYV IETALKKDIK IITTIDPLQY LRDNENDFEN LQRLKSHSNI YYKKIDNKIR SNPEISSFVK SIINLRNIPE YKFENISIEY LSKEDDWESY LLNLRDRGWT YLPYTKSRDN ISYHKYCSAN THLNTHRIIG QEFNKVIVIL DEGFKYVDGY LGYYGDYYYN PRQMLFQNLT RAREKIKIII INNTDLYKKI KQVLTKSSNK NELSLKFFIP ELNNDKLKSF YSDILGFKLI SNQKQPPGKR KISFQIGETN LGFYEKEDIS KNNKCEINIV VSNLKDLKKR ISNENMVLIN EEEGKKNKFV TLNDPLNNYL KLIEYI
|
| |