| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP2472 |
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| Symbol | hsdM |
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| ID | 3241587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | - |
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| Start bp | 2525109 |
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| End bp | 2526665 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637169146 |
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| Product | type I restriction-modification system, M subunit |
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| Protein accession | YP_190015 |
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| Protein GI | 57865903 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
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| TIGRFAM ID | [TIGR00497] type I restriction system adenine methylase (hsdM) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0275864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAACGA CGGAAAAACA AAGACAACAG CAAGCAGAAT TACAAAAGAA ATTATGGAGT
ATTGCGAATG ATTTACGTGG AAACATGGAT GCAAGTGAAT TTAGAAATTA TATACTAGGA
CTTATTTTCT ATCGCTTTTT ATCAGAAAAA ACAGAAGAAG AAGTGGCTGA GTTATTAAAA
GAGGACAATA TTTCATATGC AGAAGCTTGG GAAGACGAAG CATATCGTGA AGCGTTACAA
CAAGAATTAA TTAATTTAAT TGGTTTTGTG ATTGAACCTC AAGATTTATT TAGTCACTTA
ATTCAGAAAA TTGAAACTCA AACGTTTGAA ATTGAAGACT TGCATAAAGC GATTAATAAA
ATCGAAGAAT CTACACGTGG TGAAGACAGT GAAGAAGACT TTGACCATTT ATTCGCTGAT
ATGGATTTAA ATTCTACACG TTTAGGTAAT ACCAATGCAG CACGTACGAA ACTTATTTCG
AAGGTCATGG TTAATTTAGC TACACTTCCT TTTGTGCATA GTGATATTGA AATTGATATG
TTAGGGGATG CTTATGAATA TTTAATTGGT CAATTTGCGG CTAATGCAGG TAAAAAAGCA
GGAGAATTCT ATACACCACA ACAGGTCTCT AAGATATTAG CTAAGATTGT CACAACGAAT
AAACCTAATT TAAAAAATGT TTATGACCCA ACATGTGGTT CAGGTTCATT ATTGTTACGT
GTCGGACGTG AAGCCGATGT TCGTTTCTAT TATGGTCAAG AATATAACAA TACTACATTC
AACTTAGCGC GAATGAATAT GTTACTTCAT GATGTGAACT ATACACGTTT TAAAATTGAT
AATGATGATA CCTTAGAAAA TCCTGCATTT AGAGGAGAAA AATTTGATGC CGTGGTTGCC
AATCCCCCTT ATAGTGCGAA ATGGAGTGCC GATCCATCAT TCTTAGATGA TGAACGCTTT
AGCGGTTATG GTAAATTAGC ACCGAAGTCA AAAGCAGATT TTGCCTTCAT TCAACATATG
ATTCATTATT TAGACGATAA TGGCACAATG GCTGTCGTTT TACCACATGG TGTGTTATTC
CGAGGTGCAG CTGAGGGCAC GATTCGTAAA TATTTAATTG AAGAAAAGAA CCATTTAGAT
GCAGTGATTG GTTTACCAGC AAACCTATTC TTTGGCACAA GTATTCCAAC AAGTATATTA
GTATTTAAAA AATGTCGTGA AGATAGTGAT AATGTATTAT TCATTGATGC TTCTCAGTCA
TTCGAAAAAG GTAAAAACCA AAATCTACTG ACAGATGAAG ATGTTGATAA AATCGTAGAG
ACATATCGCA ACAGAGAAAC CATTGATAAA TTTAGTTATG TAGTATCGTT AGATGAAATC
ATAGAAAATG ACTACAACCT AAATATTCCA AGATACGTTG ATACGTTTGA AGAAGAAGAA
CCAATTGATT TAGATCAAGT TCAACAACAG CTCTCAGATA TCGATAAAGA AATCGCCAAC
GTAGAATCAG AAATCAACGA CTATCTTAAA GAACTAGGAG TGTTAAAACA TGACTGA
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| Protein sequence | MSTTEKQRQQ QAELQKKLWS IANDLRGNMD ASEFRNYILG LIFYRFLSEK TEEEVAELLK
EDNISYAEAW EDEAYREALQ QELINLIGFV IEPQDLFSHL IQKIETQTFE IEDLHKAINK
IEESTRGEDS EEDFDHLFAD MDLNSTRLGN TNAARTKLIS KVMVNLATLP FVHSDIEIDM
LGDAYEYLIG QFAANAGKKA GEFYTPQQVS KILAKIVTTN KPNLKNVYDP TCGSGSLLLR
VGREADVRFY YGQEYNNTTF NLARMNMLLH DVNYTRFKID NDDTLENPAF RGEKFDAVVA
NPPYSAKWSA DPSFLDDERF SGYGKLAPKS KADFAFIQHM IHYLDDNGTM AVVLPHGVLF
RGAAEGTIRK YLIEEKNHLD AVIGLPANLF FGTSIPTSIL VFKKCREDSD NVLFIDASQS
FEKGKNQNLL TDEDVDKIVE TYRNRETIDK FSYVVSLDEI IENDYNLNIP RYVDTFEEEE
PIDLDQVQQQ LSDIDKEIAN VESEINDYLK ELGVLKHD
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