Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP2388 |
Symbol | geh-2 |
ID | 3241026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 2438258 |
End bp | 2440189 |
Gene Length | 1932 bp |
Protein Length | 643 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637169066 |
Product | lipase |
Protein accession | YP_189935 |
Protein GI | 57865775 |
COG category | [R] General function prediction only |
COG ID | [COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold |
TIGRFAM ID | [TIGR01168] Gram-positive signal peptide, YSIRK family |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAAATA ATAATGAAAC AAGAAGATTT AGCATTAGGA AGTACACGGT GGGAGTCGTG TCAATCATTA CTGGGATTAC AATATTTGTC AGTGGTCAGC ATGCTCAAGC TGCTGAAATG ACACAATCAT CATCAGATTC TAACGAACAG TCACAACAAA CAGAACAAGT TGAACACAAA GAAGATACAA CTCATTTATC TTACGAATTG AATCAAGAGG GTGAGACAGC GAGCCAATCA AAGACTAGTC AAGAGAATCA ATCTGATGGC AATGTACAAA AAAAGAGTAA TCAAATACAA CAAGATTCAA CACAAACGTC ACCATTAAAT GACCAAAAAC AAACTTCAAT GGAACAACAA TCAAAAGACA ATCATGTTAC CCCAAATTCA CGTCAGGATA CATATCCAAA AGGCCAAAAT CAAGATGATA AAGGCAAACA ACAGTTTAAA GATAATCAAC ACTCACAAAC AGAACATCAA CCTAATACTC AAAACCAAAA TAATGATCAA GATTCATCAG ATAAAAAGCA ACACCCATCT GATCAAACTC AAGACTCATC TTCAAAAGGA ACACAACCTA AACAATCACA GTCTATAGAA GATAGAGATA AAACAGTAAA ACAACCATCT TCTAAAGTAC ACAAAATAGG TAACACAAAA ACTGATAAAA CAGTTAAAAC AAATCAAAAA AAGCAAACAT CATTAACTTC ACCACGCGTT GTGAAATCAA AACAAACTAA ACATATCAAT CAACTTACTG CGCAAGCTCA ATATAAAAAT CAATATCCAG TCGTGTTTGT ACATGGATTT GTAGGTTTAG TCGGTGAAGA TGCATTCAGC ATGTACCCAA ATTATTGGGG TGGTACTAAA TATAACGTGA AACAAGAACT TACAAAATTA GGTTACCGAG TTCACGAAGC CAATGTAGGG GCATTTAGCA GCAATTATGA CCGTGCTGTT GAACTGTATT ATTATATTAA AGGTGGAAGA GTAGATTATG GTGCAGCACA TGCTGCAAAA TATGGTCACA AGCGTTATGG CAGAACATAT GAAGGCATCA TGCCTGATTG GGAACCAGGT AAAAAGATAC ATCTTGTTGG ACATAGTATG GGTGGCCAAA CGATACGCTT GATGGAACAT TTTTTAAGAA ATGGAAATCA AGAAGAAATA GATTATCAAC GTCAATATGG TGGTACGGTA TCCGATTTAT TTAAAGGTGG ACAAGATAAT ATGGTGTCTA CGATTACTAC ATTAGGAACG CCTCATAATG GCACACCTGC TGCAGATAAA CTAGGGTCGA CTAAATTTAT TAAAGATACA ATTAATAGAA TTGGAAAAAT TGGTGGAACT AAAGCGCTCG ATTTAGAACT AGGTTTTTCT CAATGGGGCT TCAAACAGCA ACCTAATGAA TCATATGCTG AATATGCAAA ACGTATAGCG AATAGTAAAG TTTGGGAGAC TGAAGATCAG GCTGTAAATG ATTTAACAAC TGCTGGAGCA GAAAAGTTAA ACCAAATGAC GACATTGAAT CCTAATATCG TCTATACATC ATATACAGGT GCTGCAACAC ATACTGGACC ATTAGGCAAT GAAGTGCCGA ATATTAGACA ATTCCCACTA TTCGATTTAA CAAGTCGTGT GATAGGTGGA GATGATAATA AAAATGTCAG AGTAAATGAT GGCATAGTAC CTGTGTCTTC TTCACTACAT CCAAGTGATG AAGCATTTAA GAAGGTAGGT ATGATGAACC TAGCAACTGA CAAGGGTATC TGGCAAGTGA GACCCGTACA ATATGATTGG GATCATCTAG ATTTAGTCGG CTTAGATACT ACTGATTATA AGCGAACTGG AGAAGAATTA GGTCAATTCT ATATGAGTAT GATAAATAAT ATGTTGAAAG TCGAAGAGTT AGATGGTATT ACACGTAAGT AG
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Protein sequence | MKNNNETRRF SIRKYTVGVV SIITGITIFV SGQHAQAAEM TQSSSDSNEQ SQQTEQVEHK EDTTHLSYEL NQEGETASQS KTSQENQSDG NVQKKSNQIQ QDSTQTSPLN DQKQTSMEQQ SKDNHVTPNS RQDTYPKGQN QDDKGKQQFK DNQHSQTEHQ PNTQNQNNDQ DSSDKKQHPS DQTQDSSSKG TQPKQSQSIE DRDKTVKQPS SKVHKIGNTK TDKTVKTNQK KQTSLTSPRV VKSKQTKHIN QLTAQAQYKN QYPVVFVHGF VGLVGEDAFS MYPNYWGGTK YNVKQELTKL GYRVHEANVG AFSSNYDRAV ELYYYIKGGR VDYGAAHAAK YGHKRYGRTY EGIMPDWEPG KKIHLVGHSM GGQTIRLMEH FLRNGNQEEI DYQRQYGGTV SDLFKGGQDN MVSTITTLGT PHNGTPAADK LGSTKFIKDT INRIGKIGGT KALDLELGFS QWGFKQQPNE SYAEYAKRIA NSKVWETEDQ AVNDLTTAGA EKLNQMTTLN PNIVYTSYTG AATHTGPLGN EVPNIRQFPL FDLTSRVIGG DDNKNVRVND GIVPVSSSLH PSDEAFKKVG MMNLATDKGI WQVRPVQYDW DHLDLVGLDT TDYKRTGEEL GQFYMSMINN MLKVEELDGI TRK
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