| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP2381 |
|---|
| Symbol | |
|---|
| ID | 3240938 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | - |
|---|
| Start bp | 2428109 |
|---|
| End bp | 2431126 |
|---|
| Gene Length | 3018 bp |
|---|
| Protein Length | 1005 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637169060 |
|---|
| Product | NADH:flavin oxidoreductase/fumarate reductase, flavoprotein subunit, putative |
|---|
| Protein accession | YP_189929 |
|---|
| Protein GI | 57865762 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
|---|
| TIGRFAM ID | [TIGR01813] flavocytochrome c |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAGG AAATATTCGA TACTTTTAAA TTTAAATGTG GTGCCGAATT AAAAAATAGA
GTATTAATGG CACCCATGAC TATCCAAGCT GGGTATTTTG ATGGAAGTGT TACATCAGAA
ATGATTGATT ATTATCAATT TAGAGCTGGT GATGCTTCAG CAATCATTGT TGAAAGTTGT
TTTGTTGAAA ATCACGGACG AGGATTTCCG GGAGCTATAG GTATTGATAA TGATGACAAA
ATACCTGGAC TCAAACGTTT AGCAGAAGCG ATTCAAGCTA AGGGATCAAA AGCGATTTTG
CAACTTTATC ATGCCGGAAG AATGGCAAAT CCTAAATTTA ATGAAGGAGA GCAGCCGATA
TCTGCGAGCC CCATTGCAGC ATTAAGACCT GATGCTGTAC CACCTAGAGA AATGACACAT
GCTCAAATCA ATCAGATGAT TGATGACTTT GGAGAGGCTA CACGTCGCGC TATAGAAGCG
GGGTTTGATG GTGTCGAAAT TCATGGCGCC AACACATACT TATTACAACA ATTTTTCTCT
CCACATTCTA ATCGGAGACA AGATTCATGG GGAGGCAGTC GTGAAAAACG TACACGATTT
CCAATCGAAG TTTTAACAAA GGTTCAACAC GTCGTTGCTG AAAAAGAGGC TTCTCATTTT
ATTATAGGAT ATCGATTCTC ACCTGAAGAA ATTGAAGAAC CAGGCATACG TTTTGAAGAT
ACTATGTTTT TACTAAATAC ATTAGCAGAA TATGAACCTG ATTACTTCCA TATATCAGCA
AACAGTTATC AACGTACATC TATTGTGAAT CAAGAAGATA CAGAACCTTT AATTAATAAG
TACATCAAAA TGCAAAGTGC ACAGTTGGCA AAAATTCCAT TAATTGGTGT AGGTAGTATT
GCCCAACGAC AAGATGCAGA ACATGCCCTT GAACTAGGAT ATGATCTTTT AAGTGTTGGG
AAAGCCTATT TAGTGGAACC ACAATGGACA GATAAAATTT CACAAAACGA AGAAGTAGAA
CAATTTGTCG ATATACATGA TCAGAAAGTA CTTCACATAC CATCCCCTTT ATGGAAAGTA
ATGGACTTTA TGATTTTAGA TAAAGAAGAA GAGCATCGTA AATATGAAAA ATTAAAAGCA
CTTCAAAATA AAAAAGTTAA ATTTAACAAA GGTACGTATC ATGTCTATGC AAAAGGTCAT
AATGGCAACT TACCTATGAA AGTCCAATTA TCAGAAGATA AGATTGTAAG TATCGAGGTA
GATGATAGCG GAGAGTCTGA AGGCATAGCG AACCCAGTGT TTGAACGTTT ACCTCAAGAT
ATTATCAATG GGCAAACACT GAATGTAGAT GTCATTTCAG GTGCGACAGT AACAAGTGAA
GGCATCGTGC AAGGTATTGC AGATGCAATT GAACAAGCAG GAGAAGACCC AGATATTTTA
CGGGCGCGTC CTAAACCAGT CGTTCAGTGG TCTGATGAGG TCGTTGAAGA GACGACTGAC
GTCGTTGTGA TCGGTACAGG AGGTGCCGGA CTCAGTGCAG CTGCTACGGT ATTAGATGAA
GGAAAAGAAG TCATCATGCT TGAGAAATTT GCGGCGATAG GTGGCAATAC TATCCGTACA
GGTGGTCAAG TCAACGCTGC TGAGCCTAAA TGGCAAAATG CATTCCCGGC ACTTGCTGGT
GAAAAAGAGA CACTCATACA GTTATTAAAT CATGATGAAA ATGATATAGA TGAAGCTTAC
ATTGAAGATT TCAATACTTT AAAACGTCAA ATTAAAGACT ATCTTGAAAA TAGCAGTAAT
GAAGATGAAT ATCTTTTTGA TTCTGTCGAA TTACATCGTA TTCAAACATA TTTAGGTGGT
AAACGTAAAG ATCGTAATAA TGTCGAAATA TCAGGTGATT ATGATTTAGT TAAAACACTC
ACAGATAACG TTTTGGAATC TGTATACTGG TTGAAAGACA AAGGTGTACA TTTTGATCGT
TCGTTTGTAG ATATGCCTGT GGGTGCTTTA TGGCGTCGTG GTCATAAACC AATGAAAGCA
CAAGGTTTAG AGTACATTGA AAATTTAGGA GACTACGTTA AACATAATCA TGGTCGTATT
TTTACAGAAA CTACTGCAGA AAAGTTAATC AAAGAAGGTA ATCAAGTTGT TGGTATTGAA
GCACGTAAAG CAAATGGTGC TAAAGTGAAG ATTCATACAC GTCATGGTGT AGTGTTGGCT
ACTGGTGGCT TTGGAGCGAA TACAAAAATG CTACAACAAT ATAATACGTA TTGGGATAAT
ATTCCTGATG ACATTAAGAC AACGAATTCT CCTGCAATTA CAGGTGATGG TATACGTTTA
GGTGTGCAGG CAGGCGCTGA CATCGTAGGT ATGGGATTCT CTCAAATGAT GCCGATTTCT
GATCCGAAGA CAGGTGCATT ATTTACTGGA TTAATCGTAA CACCTTCAAA CTTTGTCTTC
GTTAATAAGG AAGGACAACG TTTTGTTAAC GAATTTGAAA GTAGAGATGT ATTATCTAAG
GCAGCATTAG AACAAAAAGA CGGTATCTTC TATATTATTG CAGATGCAAA TATTAAAGCA
CTAGCTATGA ATACAACTGA GGATAAAATT AATCAAGAAT TAGAAGACGG CACTTTAGTA
AAAGCAGATA CCTTAGAAGC ATTAGCCCAA AAATTAAACA TTGATACAAC TACTTTTGTG
AACACGATTG AAAGATATAA TACCTTCGTA GAACAAGGAC AAGATGAAGA TTTCAATAAA
AATGCATTTG ATTTAAAAAT TGAAAAAGCA CCATTCTATG CGACACCACG TAAACCTGCA
ATACATCATA CTATGGGTGG TTTAAAAATA AACACGCATG CACAAGTTAT AGATGTTGAA
GGTCATATCA TTGAAGGTTT ATATGCGGCT GGTGAAGTTG CCGGTGGTAT TCATGCTGGT
AACCGTTTAG GCGGAAATGC ACTGGCAGAT ATTTTTACTT TTGGTCGCAT TGCCGGTCAA
AGTGCTGTAA CGAAATAA
|
|---|
| Protein sequence | MSKEIFDTFK FKCGAELKNR VLMAPMTIQA GYFDGSVTSE MIDYYQFRAG DASAIIVESC
FVENHGRGFP GAIGIDNDDK IPGLKRLAEA IQAKGSKAIL QLYHAGRMAN PKFNEGEQPI
SASPIAALRP DAVPPREMTH AQINQMIDDF GEATRRAIEA GFDGVEIHGA NTYLLQQFFS
PHSNRRQDSW GGSREKRTRF PIEVLTKVQH VVAEKEASHF IIGYRFSPEE IEEPGIRFED
TMFLLNTLAE YEPDYFHISA NSYQRTSIVN QEDTEPLINK YIKMQSAQLA KIPLIGVGSI
AQRQDAEHAL ELGYDLLSVG KAYLVEPQWT DKISQNEEVE QFVDIHDQKV LHIPSPLWKV
MDFMILDKEE EHRKYEKLKA LQNKKVKFNK GTYHVYAKGH NGNLPMKVQL SEDKIVSIEV
DDSGESEGIA NPVFERLPQD IINGQTLNVD VISGATVTSE GIVQGIADAI EQAGEDPDIL
RARPKPVVQW SDEVVEETTD VVVIGTGGAG LSAAATVLDE GKEVIMLEKF AAIGGNTIRT
GGQVNAAEPK WQNAFPALAG EKETLIQLLN HDENDIDEAY IEDFNTLKRQ IKDYLENSSN
EDEYLFDSVE LHRIQTYLGG KRKDRNNVEI SGDYDLVKTL TDNVLESVYW LKDKGVHFDR
SFVDMPVGAL WRRGHKPMKA QGLEYIENLG DYVKHNHGRI FTETTAEKLI KEGNQVVGIE
ARKANGAKVK IHTRHGVVLA TGGFGANTKM LQQYNTYWDN IPDDIKTTNS PAITGDGIRL
GVQAGADIVG MGFSQMMPIS DPKTGALFTG LIVTPSNFVF VNKEGQRFVN EFESRDVLSK
AALEQKDGIF YIIADANIKA LAMNTTEDKI NQELEDGTLV KADTLEALAQ KLNIDTTTFV
NTIERYNTFV EQGQDEDFNK NAFDLKIEKA PFYATPRKPA IHHTMGGLKI NTHAQVIDVE
GHIIEGLYAA GEVAGGIHAG NRLGGNALAD IFTFGRIAGQ SAVTK
|
|---|
| |