Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP2375 |
Symbol | |
ID | 3242472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 2423457 |
End bp | 2424296 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637169054 |
Product | diaminopimelate epimerase family protein |
Protein accession | YP_189923 |
Protein GI | 57865749 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0253] Diaminopimelate epimerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0350844 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACGTC AAGTGGTCGA ATTTTCAAAA TATAATCCAT CTGGGAATAT GACAATTCTT GTTCATTCAA AGCATCAACC GAGCGAATAT GCTGCGATTG CACATCAGTT GATGGCGACA ACACACATGT GTTGTGAACA AGTAGGGTTT ATTGAATCAG TAAACTATGA AAATGGGGAT AACTATCACT TGGTAATGAG TGGAAATGAA TTTTGTGGTA ATGCGACTAT GTCTTACATT CACTATTTAA AAGAACGTTT ATTGATACAG CATCAACAAT TTCAATTAAG AGTTTCGGGG TGTTCTCATC CTGTAGAGTG TAAAGTTCAT TCGCAACATT ATGAAGTGAC TATGCCAAAA GTACATCAAG TTAAGGAAAG ATTTGTGAAA TTAGGGGAAC AGCAGTTTAA AGCATTTGAA ATTAGCTATG ATACATACAT TCACTATGTG ATGATGTGTG ATGATGTAGA TTTGGCAATA AAACAGTGCG TGGAAGATTT TGTCAGTGCG CAAACATGGC ATCGACAATT TAAAACAATT GGTGTCATGC TTTTTCAACA AGATAAACAA TTCATATATC CACTGATACA TATACCTGCA ATAGATAGCT TAATCTGGGA AAATAGCTGT GGTTCAGGAG CGGCTTCTAT CGGTGTGTTG GTTAATTATC TAACAGATCA TGATATTCAA GATTACCTAG TTAACCAACC CGGAGGCAGT ATTATTGTCT CATCCAGAAA GTCTGGACAA AATGAATATC AAACAACGAT TAAGGGTCAA GTTTCAACTG TTGCAACAGG ACAAGCATAT ATAGAACAGG AGACAATGAC GCAAATATGA
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Protein sequence | MQRQVVEFSK YNPSGNMTIL VHSKHQPSEY AAIAHQLMAT THMCCEQVGF IESVNYENGD NYHLVMSGNE FCGNATMSYI HYLKERLLIQ HQQFQLRVSG CSHPVECKVH SQHYEVTMPK VHQVKERFVK LGEQQFKAFE ISYDTYIHYV MMCDDVDLAI KQCVEDFVSA QTWHRQFKTI GVMLFQQDKQ FIYPLIHIPA IDSLIWENSC GSGAASIGVL VNYLTDHDIQ DYLVNQPGGS IIVSSRKSGQ NEYQTTIKGQ VSTVATGQAY IEQETMTQI
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