Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP2370 |
Symbol | |
ID | 3242237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 2417888 |
End bp | 2418766 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637169049 |
Product | peptide ABC transporter, permease protein |
Protein accession | YP_189918 |
Protein GI | 57865744 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTGTGT TACGTCGTCT ATTTCAAGAT AGAGGTGCCA TATTTGCTAT AGCTATTATT ACAATCTACG TAGTGCTTGG AGTTTTAGCT CCTTTAATTA CATTCTATGA ACCGAATCAC ATTGATACAG CAAATAAATT TGCTGGTATA AGTTGGTCTC ACTGGTTGGG AACAGACCAT TTAGGTCGAG ATGTATTAAC ACGGATAATA TACGCCATAA GACCTAGTTT GTTATATGTA TTTGTCGCAT TGATTATTTC CGTTGTGATA GGAGCGATAC TTGGGTTTAT TTCAGGTTAT TTCCCAGGTT ATATCGATGC AATAATTATG CGTATATGCG ATGTGATGTT AGCTTTTCCA AGCTATGTGG TCACATTGGC ATTGATTACG TTGTTTGGCA TGGGTGTAGA AAATATTATT ATTGCATTTA TATTGACTCG ATGGGCGTGG TTTTGTCGCG TGATTCGAAC CAGTGTAATG CAATATATTG AAGCTGATCA TGTAAAATTT GCCAAAGTAA TTGGTATGAA TGATTTAACA ATCATTCGCA AACATATTTT GCCACTAACC TTTACTGACA TAGCGATTAT TGCTAGTAGT TCGATGTGTT CAATGATATT ACAAATGTCA GGATTCTCAT TCCTTGGATT AGGTGTTAAG GCACCTACAG CCGAATGGGG GATGATGCTT AATGAAGCAC GAAAAGTAAT GTTCACACAT CCTGGAATGA TGATGACAAC AGGTGTGGCT ATCGTCATAA TTGTGATGGC GTTTAACTTT TTATCAGATG CTTTACAAAT GGCGATTGAT CCTCGTATGT CCGCTAAAGA AAAACGACTG GCTCTGAAGA AAGGTGTGAA AGCACGTGAC ACTGCTTAA
|
Protein sequence | MIVLRRLFQD RGAIFAIAII TIYVVLGVLA PLITFYEPNH IDTANKFAGI SWSHWLGTDH LGRDVLTRII YAIRPSLLYV FVALIISVVI GAILGFISGY FPGYIDAIIM RICDVMLAFP SYVVTLALIT LFGMGVENII IAFILTRWAW FCRVIRTSVM QYIEADHVKF AKVIGMNDLT IIRKHILPLT FTDIAIIASS SMCSMILQMS GFSFLGLGVK APTAEWGMML NEARKVMFTH PGMMMTTGVA IVIIVMAFNF LSDALQMAID PRMSAKEKRL ALKKGVKARD TA
|
| |