Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP2340 |
Symbol | |
ID | 3242102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 2385517 |
End bp | 2386935 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637169020 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_189889 |
Protein GI | 57865685 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTAACA TTTCGATGAC GACTTCTAAA CGTAATGCTA TCGTTACGGT AATGCTCATT AGTGCTTTTG TGTCTATGCT CAATCAAACT ATTTTAAACA CTGCACTACC AGCAATCATC AAAGGACTGA ACATCACAGA AACAACAGCA CAATGGTTAA TTACCGGATT TATGCTTGTT AACGGTATAA TGATTCCACT CACTGCCTTT TTAATGGATA AATATTCGAC ACGCCATTTA TATATTTTCT CAATGGCTAT TTTTCTTATA GGATCTATTG TAGCGGCATT TTCACCTACG TTTACAATTT TAATGATATC TCGTATTATC CAAGCGATTG GTGCCGGCAT CCTTTTACCA TTGATGCAGT TTACAGTATT TACACTGTTT CCTGCTGAAC AACGTGGGTT TGCGATGGGA TTGGCAGGGG TGGTTGTACA AAGTGCGCCT GCAATTGGAC CAACGTTAAC TGGATTATTC GTAGATTTAT TTAGTTGGAG AATGCCTTTT TATCTTGTTT CAGCAATTGC TGCGGTAGCT TTTATTTTAG GTTTCTTCTT CGTAGAAAAT AATACAAAAA CAAAAGACAT TGTTCTTGAT AAAATTTCTG TAGTTTATTC TACTTTCGGC TTTGGTTTAA TATTATTCGC ATTTAGTAGC GTGAGTACGT TTGGTATCAC CTCTCTACCT GTCATTGTGA CATTTGTACT CGGTATAGCC ATTATCATAA TTTTTACAAC GCGTCAGCTT AAATTAAAAC ATCCATTGTT AAATATGCGT GTGTTTAAAA ATAAAGTGTT CACACTTTCA GCTGTTTCTT CAATGCTTGT ATATATTACG ATGGTAAGTC CTGCGTTACT CATACCTATC TACATTCAAA CAGGTTTAGG TCAATCAGCA TTACTATCAG GTGTTGTTGT ACTTCCAGGC GCGGTCATTA ATGGATTAAC GATGGTTTAT ACAGGGAAAA TTTTTGATAA GCATGGTATT AAAGTGCTTG TGATACCTGG TTTTATCTTA CTCATTAGTA TGACATTCTT ATATTCATTC CTTACTACAG GAACGCCATA TTGGTTTGTT ATTCTTGTTT ACACTATAAG AATGATTGCG TTAGGATTAT TAGTTATGCC TCTTAATACA GTTGGACTGA ATGCACTTGA GTCAGATGAT GTCTCACATG GTACAGCAAT TATGAATTCC TTACGCATCA TTGCAGGTGC TATGGGTACA GCGGTTAGTG TGACGATTCT ATCAATAGTG GCAAAACAGT ATACAGCTTC ACACTCGACA ATGTCAAAAA TGAAACTAAC ACAAGAAGCA ACTGTACATG GTATAGATGT TGCATTTATT TTTACTACAG TATTAATCAT TATTGGATTT ATTTTAGCGT TATTCATAAA AGAAGAAAAA AATCATTAA
|
Protein sequence | MSNISMTTSK RNAIVTVMLI SAFVSMLNQT ILNTALPAII KGLNITETTA QWLITGFMLV NGIMIPLTAF LMDKYSTRHL YIFSMAIFLI GSIVAAFSPT FTILMISRII QAIGAGILLP LMQFTVFTLF PAEQRGFAMG LAGVVVQSAP AIGPTLTGLF VDLFSWRMPF YLVSAIAAVA FILGFFFVEN NTKTKDIVLD KISVVYSTFG FGLILFAFSS VSTFGITSLP VIVTFVLGIA IIIIFTTRQL KLKHPLLNMR VFKNKVFTLS AVSSMLVYIT MVSPALLIPI YIQTGLGQSA LLSGVVVLPG AVINGLTMVY TGKIFDKHGI KVLVIPGFIL LISMTFLYSF LTTGTPYWFV ILVYTIRMIA LGLLVMPLNT VGLNALESDD VSHGTAIMNS LRIIAGAMGT AVSVTILSIV AKQYTASHST MSKMKLTQEA TVHGIDVAFI FTTVLIIIGF ILALFIKEEK NH
|
| |