| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP2336 |
|---|
| Symbol | |
|---|
| ID | 3242558 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | - |
|---|
| Start bp | 2373203 |
|---|
| End bp | 2375389 |
|---|
| Gene Length | 2187 bp |
|---|
| Protein Length | 728 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637169016 |
|---|
| Product | lipase, putative |
|---|
| Protein accession | YP_189885 |
|---|
| Protein GI | 57865673 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold |
|---|
| TIGRFAM ID | [TIGR01168] Gram-positive signal peptide, YSIRK family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATA AAAAGAATTC ATATAGCATT CGAAAGTTAA GTGTAGGTGC GTCTTCAATC
ATTGTTGCAT CGATGTTATT TATTGGCGGA GGCTCAGTAC ATGCTGCTGA ATCCAATCAC
CTTGAAAATC AAGAACAATC AGAAGTAAGT GTATCACATT CTATTGAGAT GCAACACAAA
AATCAAGAAA CTCAACAACC TGAGAATAAA GATAATAAAA CTAACCATTC AGAAACAATT
GATAAGACTC CAACTATACA TAACAATGGC TACTCATATC ATGAGACACC TAGTACTGAC
GTTAAATCTA ATGAAGACAA ACAAATTGAT AGTCAATCCA ATCAACCTCA GACATCTATG
CCAAATAATG ATCAACAAAA CCCTAAAAAA GTAGCGGAAC ATACAACGAA AAGCATAAAT
GCAAAAAAAG AAGAAACTAG AAAGAATGAA AATGCAAAGA GCCTAGTACA ACCCCAACAA
GATGATAAAA CAACATCTGA ACAAACAAAA ATTAAAGAAT CACGTGAACA GGAGATTACA
AACGAGCAAA AGCAGTTACA AAGTAAAGAT ATAAAAAATG CTCAACAAGA AAATCAAAAT
ATAGACCAAG AAAAATCTCA AGAAAAAATT AAAGTCCAAC AATCGAACAT CGAAAAGGCT
CAAAAATCTT CAAGAATAGA TGGAAAATTA GATAATCAAT ACAATAAAGA TGCAACACAA
TCGGATGAGG GGACTGCATC TGAGAATGTT TCAGAGCAGC ATATAACAGC AAAAGATGGA
GGTGTTACAC GAAATAATCG TGGAGATAAA CATTTAAATC AAGAAAAGCC AACAACATCA
TCAGATAAAG AACTTAAAGT GGATGACATA GACAAAGATC TTTCAACGAA AGAATCTCCT
GAAAATGAAA AAGATGATTC TAGAAAAGGG ATTAAAGCAC TCACTAAAAA TTCTCAGGCA
ACAACAAGAA ATACTGCGAC AACAGAAGCA TCCAAAGAAT TGAAGGATCA AACAAATAAA
GTAGCATCAC AAAAAGAATA TAAAAATCAC GATCCTATTA TTCTCGTACA TGGATTTAAT
GGTTATGCAT CAGGAACTGG TCCCGTTACA GGAAAAGGTA ATTATTGGGG TGGTGACCGT
CTCAAAATTA TTCAAGATTA TAGAGCTAAA GGTTATAACG TGATGGAAGC AAGTGTAAGT
GCATTTGGCA GTAATTATGA TAGAGCTGTA GAATTGTACT ATTACATTAA AGGTGGACGC
GTAGACTATG GTGCGGCACA TACTGCAAAA TATGGACACG AGCGTTACGG AAAAACATAC
GCCGGTGCTT ATAAGGATTG GAAGCCTGGT CAAAAAATTC ATCTCATTGG CCATAGTATG
GGTGGTCAAA CAATTCGTTA TCTTGAAGAG TTATTACGAC ATGGTAGTCC AGAAGAGGTA
GAATACCAAA AACAACATGG TGGTGACATT TCCCCGTTAT ATAAAGGTGG GCAAGATAAT
ATGATATCGT CTATTACTAC TATTGCCACA CCACATAATG GCACCCATGC TGCAGATTTA
TTAGGTAATG AAGAAATTAT TAGACAAGTA GCATATGACT ATGCAAGGTC AAAAGGTAAT
AAATTATCTC ATGTTGATGT TGGTTTAAGT CAATGGGGAC TTAAACAAAG AGAAGACGAA
ACATTAGCTC AATATATTCA ACGTGTGAAA CAAAGTAAAT TATGGACAAC AAAAGATAAT
GGATTTTATG ATTTAACTAC TGAGGGTACA GATATCTTAA ATCAAAAAAC ATCCTTAAAC
CCCAATATTG TTTACAAAAC ATATCAGGGT GAATCTACAA GACCAGGTCC AAATGGTACT
CAAAAAGCAG ATGTCAATAT GAACATAGGC TATACATTAA CTGCAAATAC GATTGGTAAA
GTAAAAGACA AAGCGTGGAG AGAAAACGAT GGACTAGTGT CTGTCATCTC TGGGCAATAT
CCATTGAACC AAGCGCATAC GTCTGCGACA GATCAAGTTC AAAAAGGAGT ATGGCAAGTG
ACACCAGTTA AACATAATTG GGACCATGGT GACTTCGTTG GTACAGATAC ATCAGAAGTT
CGTATCTCTA AAGAAGAATT AGAAGATTTC TGGGACAACA TGTTTGAAGA TATGGTACGT
AATGAAAAAG TGACAGATAA ACAATAA
|
|---|
| Protein sequence | MKNKKNSYSI RKLSVGASSI IVASMLFIGG GSVHAAESNH LENQEQSEVS VSHSIEMQHK
NQETQQPENK DNKTNHSETI DKTPTIHNNG YSYHETPSTD VKSNEDKQID SQSNQPQTSM
PNNDQQNPKK VAEHTTKSIN AKKEETRKNE NAKSLVQPQQ DDKTTSEQTK IKESREQEIT
NEQKQLQSKD IKNAQQENQN IDQEKSQEKI KVQQSNIEKA QKSSRIDGKL DNQYNKDATQ
SDEGTASENV SEQHITAKDG GVTRNNRGDK HLNQEKPTTS SDKELKVDDI DKDLSTKESP
ENEKDDSRKG IKALTKNSQA TTRNTATTEA SKELKDQTNK VASQKEYKNH DPIILVHGFN
GYASGTGPVT GKGNYWGGDR LKIIQDYRAK GYNVMEASVS AFGSNYDRAV ELYYYIKGGR
VDYGAAHTAK YGHERYGKTY AGAYKDWKPG QKIHLIGHSM GGQTIRYLEE LLRHGSPEEV
EYQKQHGGDI SPLYKGGQDN MISSITTIAT PHNGTHAADL LGNEEIIRQV AYDYARSKGN
KLSHVDVGLS QWGLKQREDE TLAQYIQRVK QSKLWTTKDN GFYDLTTEGT DILNQKTSLN
PNIVYKTYQG ESTRPGPNGT QKADVNMNIG YTLTANTIGK VKDKAWREND GLVSVISGQY
PLNQAHTSAT DQVQKGVWQV TPVKHNWDHG DFVGTDTSEV RISKEELEDF WDNMFEDMVR
NEKVTDKQ
|
|---|
| |