Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP2334 |
Symbol | |
ID | 3242556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 2371584 |
End bp | 2372924 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637169014 |
Product | major facilitator superfamily protein |
Protein accession | YP_189883 |
Protein GI | 57865671 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAGCAA ATAAGTATTT AATCTTTATT TTGGGAGCAC TTGGTGGCTT ATTATATGGT TATGATAATG GTGTGATTTC CGGTGCTTTA TTATTTATAC ATAAAGACAT ACCTCTCAAT AGTACAACTG AGGGTATCGT TGTGTCTTCA ATGTTAATTG GCGCAATAGT CGGTGCGGGA AGCAGTGGGC CACTTGCTGA TAAATTAGGT CGTCGACGTC TAGTAATGCT CATCGCTATT GTATTTATTA TTGGGGCACT GATTCTTGCT GCATCAACCA ATTTAGCATT ATTAATTATT GGACGTTTAA TTATTGGTTT AGCAGTAGGT GGTTCGATGT CTACGGTACC TGTTTATTTA AGTGAAATGG CACCGACAGA ATATCGTGGC TCACTAGGTT CACTTAATCA ACTAATGATT ACAATTGGTA TTTTAGCAGC ATATTTAGTC AACTATGCAT TTGCGGATAT TGAGGGTTGG CGTTGGATGC TAGGATTAGC AGTTGTTCCA TCGGTTATTT TACTTGTGGG TATTTATTTT ATGCCTGAGA GTCCAAGATG GTTACTTGAA AATAGAAACG AAGAAGCCGC TCGTCAAGTG ATGAAGATTA CTTATGACGA TAGCGAAATT GATAAAGAAC TTAAAGAGAT GAAAGAAATT AACGCTATCT CTGAATCTAC ATGGACAGTC ATTAAATCAC CATGGTTAGG TAGAATATTA ATTGTAGGTT GTATATTTGC TATTTTCCAA CAATTTATTG GTATCAATGC AGTCATTTTC TATTCATCTT CAATCTTTGC TAAGGCTGGA CTGGGTGAAG CGGCGTCTAT ATTAGGTTCA GTTGGTATAG GAACTATTAA TGTTCTTGTA ACAATAGTTG CCATTTTTGT AGTAGATAAG ATTGATCGTA AAAAACTACT TGTTGGTGGT AATATTGGTA TGATTGCCTC ATTATTAATT ATGGCAATCT TAATTTGGAC AATTGGAATT GCTTCATCAG CGTGGATTAT TATTGTTTGT TTATCATTAT TTATTGTATT CTTTGGGATT TCTTGGGGAC CTGTTCTATG GGTTATGCTA CCTGAATTAT TCCCGATGCG CGCACGTGGC GCTGCTACGG GCATTTCAGC GCTTGTGCTA AATATCGGAA CGCTTATCGT GTCATTGTTC TTCCCAATAT TAAGTGATGC ATTAAGTACA GAATGGGTAT TTTTAATCTT TGCATTCATA GGTGTTTTAG CGATGATTTT CGTAATTAAA TTCTTACCAG AAACACGCGG ACGTAGTTTA GAAGAAATAG AATATGAATT ACGTGAACGT ACAGGAGCAA GAACTGAATA A
|
Protein sequence | MKANKYLIFI LGALGGLLYG YDNGVISGAL LFIHKDIPLN STTEGIVVSS MLIGAIVGAG SSGPLADKLG RRRLVMLIAI VFIIGALILA ASTNLALLII GRLIIGLAVG GSMSTVPVYL SEMAPTEYRG SLGSLNQLMI TIGILAAYLV NYAFADIEGW RWMLGLAVVP SVILLVGIYF MPESPRWLLE NRNEEAARQV MKITYDDSEI DKELKEMKEI NAISESTWTV IKSPWLGRIL IVGCIFAIFQ QFIGINAVIF YSSSIFAKAG LGEAASILGS VGIGTINVLV TIVAIFVVDK IDRKKLLVGG NIGMIASLLI MAILIWTIGI ASSAWIIIVC LSLFIVFFGI SWGPVLWVML PELFPMRARG AATGISALVL NIGTLIVSLF FPILSDALST EWVFLIFAFI GVLAMIFVIK FLPETRGRSL EEIEYELRER TGARTE
|
| |