Gene SERP2334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP2334 
Symbol 
ID3242556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp2371584 
End bp2372924 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content36% 
IMG OID637169014 
Productmajor facilitator superfamily protein 
Protein accessionYP_189883 
Protein GI57865671 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00879] MFS transporter, sugar porter (SP) family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCAA ATAAGTATTT AATCTTTATT TTGGGAGCAC TTGGTGGCTT ATTATATGGT 
TATGATAATG GTGTGATTTC CGGTGCTTTA TTATTTATAC ATAAAGACAT ACCTCTCAAT
AGTACAACTG AGGGTATCGT TGTGTCTTCA ATGTTAATTG GCGCAATAGT CGGTGCGGGA
AGCAGTGGGC CACTTGCTGA TAAATTAGGT CGTCGACGTC TAGTAATGCT CATCGCTATT
GTATTTATTA TTGGGGCACT GATTCTTGCT GCATCAACCA ATTTAGCATT ATTAATTATT
GGACGTTTAA TTATTGGTTT AGCAGTAGGT GGTTCGATGT CTACGGTACC TGTTTATTTA
AGTGAAATGG CACCGACAGA ATATCGTGGC TCACTAGGTT CACTTAATCA ACTAATGATT
ACAATTGGTA TTTTAGCAGC ATATTTAGTC AACTATGCAT TTGCGGATAT TGAGGGTTGG
CGTTGGATGC TAGGATTAGC AGTTGTTCCA TCGGTTATTT TACTTGTGGG TATTTATTTT
ATGCCTGAGA GTCCAAGATG GTTACTTGAA AATAGAAACG AAGAAGCCGC TCGTCAAGTG
ATGAAGATTA CTTATGACGA TAGCGAAATT GATAAAGAAC TTAAAGAGAT GAAAGAAATT
AACGCTATCT CTGAATCTAC ATGGACAGTC ATTAAATCAC CATGGTTAGG TAGAATATTA
ATTGTAGGTT GTATATTTGC TATTTTCCAA CAATTTATTG GTATCAATGC AGTCATTTTC
TATTCATCTT CAATCTTTGC TAAGGCTGGA CTGGGTGAAG CGGCGTCTAT ATTAGGTTCA
GTTGGTATAG GAACTATTAA TGTTCTTGTA ACAATAGTTG CCATTTTTGT AGTAGATAAG
ATTGATCGTA AAAAACTACT TGTTGGTGGT AATATTGGTA TGATTGCCTC ATTATTAATT
ATGGCAATCT TAATTTGGAC AATTGGAATT GCTTCATCAG CGTGGATTAT TATTGTTTGT
TTATCATTAT TTATTGTATT CTTTGGGATT TCTTGGGGAC CTGTTCTATG GGTTATGCTA
CCTGAATTAT TCCCGATGCG CGCACGTGGC GCTGCTACGG GCATTTCAGC GCTTGTGCTA
AATATCGGAA CGCTTATCGT GTCATTGTTC TTCCCAATAT TAAGTGATGC ATTAAGTACA
GAATGGGTAT TTTTAATCTT TGCATTCATA GGTGTTTTAG CGATGATTTT CGTAATTAAA
TTCTTACCAG AAACACGCGG ACGTAGTTTA GAAGAAATAG AATATGAATT ACGTGAACGT
ACAGGAGCAA GAACTGAATA A
 
Protein sequence
MKANKYLIFI LGALGGLLYG YDNGVISGAL LFIHKDIPLN STTEGIVVSS MLIGAIVGAG 
SSGPLADKLG RRRLVMLIAI VFIIGALILA ASTNLALLII GRLIIGLAVG GSMSTVPVYL
SEMAPTEYRG SLGSLNQLMI TIGILAAYLV NYAFADIEGW RWMLGLAVVP SVILLVGIYF
MPESPRWLLE NRNEEAARQV MKITYDDSEI DKELKEMKEI NAISESTWTV IKSPWLGRIL
IVGCIFAIFQ QFIGINAVIF YSSSIFAKAG LGEAASILGS VGIGTINVLV TIVAIFVVDK
IDRKKLLVGG NIGMIASLLI MAILIWTIGI ASSAWIIIVC LSLFIVFFGI SWGPVLWVML
PELFPMRARG AATGISALVL NIGTLIVSLF FPILSDALST EWVFLIFAFI GVLAMIFVIK
FLPETRGRSL EEIEYELRER TGARTE