Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP2331 |
Symbol | rarD |
ID | 3240924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 2368097 |
End bp | 2369002 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637169011 |
Product | rarD protein |
Protein accession | YP_189880 |
Protein GI | 57865810 |
COG category | [R] General function prediction only |
COG ID | [COG2962] Predicted permeases |
TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGTCTT CGGAGTATAA AAAAGGAATA TTTTTAGCTT TAGGTGCTTA TATTTTATGG GGGATTTTAC CCATATATTG GCGTTTAATT GATGAAATAG GCGCTTTTGA AATTTTGGCA TTCCGTATTA TTTTTTCAGT GATATTTATG ATTTTTGTGC TCATTATAGG AAAAAATCAA CGGAACGCTT TTTTTAGAGA TGTTAATCAG TTGGTATCGC ATCCCGTGCA ACTTATTGCC ATCATAGTTG CAGGGTATGT TATTACAGTG AATTGGGGGA CATTTATTTG GGCAGTATCT AATGGTCACG TGCTACAATC TAGCTTAGGT TACTACATTA ACCCACTAGT GAGTATCGTC TTGGCGCTTA TATTTTTAAA AGAGAGATTT AATAAATTCG AATGGTTAGC CATCATCTTT GCACTAGTAG GCGTACTTTA TATGACAATA AAAATCGGTG AATTTCCATT TATTTCACTT CTATTAGCAT TTTCTTTTGG TATATATGGT TTATTAAAAA AGATTGTGCA TATCGATGCG ATAAGTAGCA TCACTATTGA ATGTATTGTT ACTGCACCAG CCGGTTTAAT CTATGTTATT TACCTATGGC AGCAACAACA CATAACATTT GGATTAAATA TATCATCATT TTGGCTACTA TTTTCAGGTG CAATTACAGC AATACCATTG ATTCTGTTCT CAGCAGGTGC TAAGCGAATT CCATTATCGT TAACTGGCTT CATTCAGTAT GTAGGGCCGA CAATCATGTT TATCTTAGGT ATCTTTGTCT TTAAAGAGCC ATTTAACACT GATCAATTGA TTACCTTTAT TTTTATATGG ATAGGTATTG TGTTATATAG TATTTCTCAA TATGTTCAAA TTAAGAAAAA CCCAGTTGTA AAATAG
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Protein sequence | MVSSEYKKGI FLALGAYILW GILPIYWRLI DEIGAFEILA FRIIFSVIFM IFVLIIGKNQ RNAFFRDVNQ LVSHPVQLIA IIVAGYVITV NWGTFIWAVS NGHVLQSSLG YYINPLVSIV LALIFLKERF NKFEWLAIIF ALVGVLYMTI KIGEFPFISL LLAFSFGIYG LLKKIVHIDA ISSITIECIV TAPAGLIYVI YLWQQQHITF GLNISSFWLL FSGAITAIPL ILFSAGAKRI PLSLTGFIQY VGPTIMFILG IFVFKEPFNT DQLITFIFIW IGIVLYSISQ YVQIKKNPVV K
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