| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP2328 |
|---|
| Symbol | |
|---|
| ID | 3242240 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | + |
|---|
| Start bp | 2365343 |
|---|
| End bp | 2366761 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637169008 |
|---|
| Product | anion transporter family protein |
|---|
| Protein accession | YP_189877 |
|---|
| Protein GI | 57865800 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0471] Di- and tricarboxylate transporters |
|---|
| TIGRFAM ID | [TIGR00785] anion transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGAAGTA CTGTTAAATA TCGTAAGTTT ATTCTACCTA TTGTCGTTGG TTTAATTATC
TGGGCATTGA CGCCTATTAA ACCAGATGCC TTAAATGATC AAGCTTGGTT TATGTTTGCT
ATTTTTGTGT CAACCATCAT TGCTTGTATT ACCCAACCTA TGACTATAGG TGCAGTATCA
ATCATTGGTT TTACAATCAT GATTTTGGTT GGAATTGTTG ATACAAAAAC TGCCGTTCAA
GGCTTCGGTA ATAGTAGTAT TTGGCTTATT GCAATGGCCT TTTTCATTTC AAGAGGATTT
GTAAAAACAG GGCTAGGTCG ACGTATTGCT CTGCAATTCG TTAAATTATT TGGAAAGAAA
ACGCTTGGTT TGGCTTATTC ACTTGTTGGT GTTGATCTTA TCTTAGCTCC TGCTACGCCA
AGTAATACAG CACGTGCTGG TGGTATTATG TTTCCAATCA TTAAGTCCTT GTCAGAGTCA
TTTGGTTCAT CGCCGAGAGA TGGTTCTGAG AGAAAAATGG GTGCGTTTTT AATCTTTACT
GAGTTCCAAG GTAATTTAAT TACTTCAGCT ATGTTTTTAA CAGCTATGGC CGGTAACCCT
ATAGCGCAAA GTTTAGCTGA AAAAACGGCA CACGTTCAAA TTACATGGAT GAATTGGTTT
GTTGCTGCTA TTATACCCGG ATTGATTTCT CTCATCGTTG TCCCTTTCAT TATTTATAAA
TTATACCCAC CAACTGTTAA AGAAACGCCT AACGCTAAAA AATGGGCTAC TGAACAACTA
GAAGAAATGG GACATATGTC TATAGCCGAA AAATTGATGG TTGGTATCTT TATCATAGCA
TTGGCTTTGT GGGTATTAGG AAGCTTCATT AATGTTGATG CCACGCTCAC TGCATTTATT
GCTTTAGCAT TGTTACTATT AACAGGTGTA TTAGCGTGGT CAGATATTTT AAATGAAACA
GGCGCATGGA ATACACTCGT TTGGTTCTCA GTTCTTGTAT TAATGGCAGA ACAATTAAAC
AAGTTAGGCT TTATCCCATG GTTAAGCAAA CTCATTGCTC AAGGTTTAAA TGGCTTTAGT
TGGCCTATCG TTTTAGTTTT ACTCATCTTG TTTTATTTCT ACTCACATTA TTTATTCGCA
AGTGCAACAG CACATGTCAG CGCCATGTAC GCCGCGTTAC TCGGTGTTGC AGTCGCTTCG
GGTGCACCGC CATTATTCAG TGCATTAATG TTAGGGTTCT TTGGTAACTT ACTGGCATCA
ACAACACACT ATAGTAGTGG ACCAGCGCCC ATATTATACG CAGCTGGCTA TGTTACACAA
AAGCGCTGGT GGACTATGAA TATTGTACTT GGTATAGTCT ATTTTATTAT TTGGATTGGT
GTAGGTTCAC TATGGATGAA ACTCATAGGT ATGATGTAA
|
|---|
| Protein sequence | MGSTVKYRKF ILPIVVGLII WALTPIKPDA LNDQAWFMFA IFVSTIIACI TQPMTIGAVS
IIGFTIMILV GIVDTKTAVQ GFGNSSIWLI AMAFFISRGF VKTGLGRRIA LQFVKLFGKK
TLGLAYSLVG VDLILAPATP SNTARAGGIM FPIIKSLSES FGSSPRDGSE RKMGAFLIFT
EFQGNLITSA MFLTAMAGNP IAQSLAEKTA HVQITWMNWF VAAIIPGLIS LIVVPFIIYK
LYPPTVKETP NAKKWATEQL EEMGHMSIAE KLMVGIFIIA LALWVLGSFI NVDATLTAFI
ALALLLLTGV LAWSDILNET GAWNTLVWFS VLVLMAEQLN KLGFIPWLSK LIAQGLNGFS
WPIVLVLLIL FYFYSHYLFA SATAHVSAMY AALLGVAVAS GAPPLFSALM LGFFGNLLAS
TTHYSSGPAP ILYAAGYVTQ KRWWTMNIVL GIVYFIIWIG VGSLWMKLIG MM
|
|---|
| |