Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP2301 |
Symbol | hisF |
ID | 3242475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 2341841 |
End bp | 2342599 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637168982 |
Product | imidazole glycerol phosphate synthase subunit HisF |
Protein accession | YP_189851 |
Protein GI | 57865752 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATTAAAA AAAGAGTGAT TCCATGTTTA GATGTTAAAG ATGGACGCGT CGTAAAGGGT ATCCAGTTCC AGTCATTAAG AGATATCGGT AATCCAGTTG ATTTGGCTCT TTATTATAAT GAAGCCGGTG CAGATGAACT AGTCTTTCTT GATATTTCGA AGACGGAAGC AGGACATGAT CTTATGATAG AAGTGATAGA AGCAACGGCA AAACAATTAT TTATCCCTTT GACAGTAGGA GGAGGGATTC AAAATTTAGA TGATATTACA CAACTATTAA ATCACGGAGC AGATAAAATA TCACTCAATT CAAGCGCTTT AAAACATCCA GAATTAATTC GACAAGCAAG CGAGAAATTT GGTCGTCAAT GTATTTGTAT TGCTATTGAT AGCTTTTATG ATAAAGACAG AGAGGATTAT TTCTGTACTA CGCACGGTGG TAAAAAACTA ACTGATGTCA GTGTATATGA TTGGGTACAA GAAGTAGAGC ATTTAGGTGC TGGGGAATTG CTTATAACTA GCATGCATCA TGATGGAATG AAACAAGGTT TTGATATTGA ACATTTAGCA AAAATTAAAC AATTAGTTAA TATTCCGATT ATCGCCTCTG GGGGTGGAGG AAATGCACAA CATTTTGTTG AATTATTTCA ACAAACAGAT GTTTCGGCAG GTTTAGCAGC AAGTATTTTA CATGATCAAG AAACTACAGT GGCAGAAATT AAAGATAAAA TGCGTGAAGG AGGTATCCTC GTGAGATGA
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Protein sequence | MIKKRVIPCL DVKDGRVVKG IQFQSLRDIG NPVDLALYYN EAGADELVFL DISKTEAGHD LMIEVIEATA KQLFIPLTVG GGIQNLDDIT QLLNHGADKI SLNSSALKHP ELIRQASEKF GRQCICIAID SFYDKDREDY FCTTHGGKKL TDVSVYDWVQ EVEHLGAGEL LITSMHHDGM KQGFDIEHLA KIKQLVNIPI IASGGGGNAQ HFVELFQQTD VSAGLAASIL HDQETTVAEI KDKMREGGIL VR
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