Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP2292 |
Symbol | icaR |
ID | 3241779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 2333498 |
End bp | 2334055 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 637168973 |
Product | intercellular adhesion regulator |
Protein accession | YP_189842 |
Protein GI | 57865728 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0364892 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAGATA AGATTATTGA TAACGCAATA ACCTTATTTT CCGAAAAGGG GTACGATGGT ACTACACTTG ATGATATTTC TAAAAGTGTA AATATAAAAA AGGCTAGTCT ATATTATCAT TACGATAATA AGGAAGAAAT ATATCGAAAA AGTGTTGAGA ATTGTTTCAA TTACTTTATA GATTTTTTGC TTAGGAACCA TGATGATAAT TATTCCATTG ACGGACTTTA CCAGTTTTTA TTCAAATTTA TATTCGACGT TGATGAGAGA TATATTAAAT TATATGTTCA ATTATCTAGT GCTCCAGAAG CACTGAATTC AGAAATCAAA CACCATCTTC AAGAAATTAA TACTACCTTA CATGATGAAT TGATAAAGTA TTATGATCCT ACGCACATCG CTTTGGATAA AGAGGACTTT ATAAACTTAA TTCTTCTTTT TCTTGAGACT TGGTATTTTA GAGCCTCCTT TTCACAAAAA TTCGGGATTA TTGAGGACAG TAAAAACCGT TTTAAAGACC AAGTATATTC ACTGTTAAAT GTATTTTTAA AAAAATAA
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Protein sequence | MKDKIIDNAI TLFSEKGYDG TTLDDISKSV NIKKASLYYH YDNKEEIYRK SVENCFNYFI DFLLRNHDDN YSIDGLYQFL FKFIFDVDER YIKLYVQLSS APEALNSEIK HHLQEINTTL HDELIKYYDP THIALDKEDF INLILLFLET WYFRASFSQK FGIIEDSKNR FKDQVYSLLN VFLKK
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