Gene SERP2259 details

Gene Information

• Locus tag: SERP2259
• ID: 3240484
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Staphylococcus epidermidis RP62A
• Kingdom: Bacteria
• Replicon accession: NC_002976
• Strand: +
• Start bp: 2287464
• End bp: 2289335
• Gene Length: 1872 bp
• Protein Length: 623 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 637168940
• Product: BglG family transcriptional antiterminator
• Protein accession: YP_189810
• Protein GI: 57865665
• COG category: [G] Carbohydrate transport and metabolism; [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); [COG3711] Transcriptional antiterminator

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATTGATA GACAAATCAA ACTCATCAAA TTGTTATTAA ATTATACAGA TACGTATATA 
AGTGGCTATG ATATTGCCAA ACAGTTAAAT GTATCTAATA GAACTATACG TAATGATATT 
AAAACTATAC ATACTACATT TTTAAATGAA TTAATTTTAA GTGTACAATC TAAAGGTTAT 
ATGCTAAATA CATGTCTTTA TACACCTGAT GAGATACAAT CTGCTTTAGA GTCAGTTATT 
GTAAAAGAGA ATAAATTGCT TATCACAATT GCTTATAGGT TATTTATGGA AAAGCATACA 
TTCACTATCA AAGAGCTATC TTCAACTTAC CATTTAACAA AATCAAAAGT GATTGATTAT 
GTAACACGTA TACAAACGTG GGCTATAAAA TTTGATATTT ATTTATCAAT TAAAAAGAAG 
CAAGGTATCA TGATCGATGC GAGTACAACG AGTATCAGTA ATGCTGTACT TCATATCAAT 
CAACTTACAG ACGATGACTT TAAAGTTGAA AACCTTATTT TACAAGAGTT ACCTCAAGCC 
CATACTAGAA AAATAAAACA AATTATCTCA AAGCATATAG ATAATCATCA ATTATCAACT 
TCTGAAAATA AAATACAACA ATTACTTGTG CATCTAATTT TAATTATCAA ACATTCTCAA 
CCAGAGGAAG AAGATTGGAG CACTGATACA GAATCTTTAA CTATTGCGAA AAAGTGTATA 
AAAGATATCA ATGAAACCCT TGGATATCAA CTTAACAATA AAACAAGTGA ATGCTTTTCC 
TTTTTTATTA GCTACCATTT CAATAAGTTT GATTTAGGGA TCCAACAACT ATTTATTCAA 
AGTTATATCG ATCGACTCAT TGAATTAATG GAGCAACATA TTGGTTTTCC CTTTTCACAA 
GATACAATTT TAAAAGATAA TATGAACGTC CACTTTAGTC GTACATATTT GCGATTAATG 
AGTCATGTTT ATCTAAATAA TCCATTAACA AGTCAAATCA AACGACTATA TCCCTTTGTC 
TTTAATACAC TATATGATAG TATTCGACAA TTATCACAAG ATACCAATAT CCAATTAAGC 
GAAGATGAGA TTGCCTTTTT AACTATACAT TTTCAGTCTT CTATCGAACG CCATAAGTCA 
TCACATATTC ATGTTGTAAT TGCTTGTTAT TATGGCTTAG GCATTTCAAC GTTGCTTGCT 
GAGAAAATCA AACAACTTAA TCATGCAATA CAGATCGTAG ATACATTAAA ACTTGAAGAT 
ATTAATAACT ATCATTTTGA AGGGATTGAC TTATTAATTA CTACTCACGA CTTTGATACA 
AGTCAACTTT TACAAATACC TAAAGTCATA CAAGTATCAC CTTTATTTTC AGATGAAGAT 
GCTAAAAAAA TCGAATTCTT TGTAAAAGCC ATGCAAAACC CATTATCAAA AGATGATATA 
TTATCAAAAA TTCAGTTGAG TGTTGAGTCC AATTTCAAAC TGAATCATTC AAATCACATT 
CTTCCAATTT TTGAGAAATC CAAAGAAATT TTAGATTATC ATCATGCAAC TCTAGATGGC 
TATATAGAAA GTGCCATAGA TCGCGAAAAA CAATCTTCAA CATATATAGG TAAAGGGATA 
GCACTCCCAC ACGGCAACCC TGAAAAAGTA CTGAAATCAC ACATGATTAT ATTTAAACCT 
TCTCAACCTA TAACATGGAA ACAACATGAA GTTAAACTTG TTTTCTTTTT AGCAATGAGT 
AAAAAAGATT TAAATATTAA CCGTAAAATT ATACAATCAA TTGCTCAATT AGAAGAAGAT 
GACATCCATC AATTATGTCT TTTAGATGAT TTACAACTAA AAAACACTTT GTATGCACGT 
TTTAAAGAAT AA 

 

Protein sequence

MIDRQIKLIK LLLNYTDTYI SGYDIAKQLN VSNRTIRNDI KTIHTTFLNE LILSVQSKGY 
MLNTCLYTPD EIQSALESVI VKENKLLITI AYRLFMEKHT FTIKELSSTY HLTKSKVIDY 
VTRIQTWAIK FDIYLSIKKK QGIMIDASTT SISNAVLHIN QLTDDDFKVE NLILQELPQA 
HTRKIKQIIS KHIDNHQLST SENKIQQLLV HLILIIKHSQ PEEEDWSTDT ESLTIAKKCI 
KDINETLGYQ LNNKTSECFS FFISYHFNKF DLGIQQLFIQ SYIDRLIELM EQHIGFPFSQ 
DTILKDNMNV HFSRTYLRLM SHVYLNNPLT SQIKRLYPFV FNTLYDSIRQ LSQDTNIQLS 
EDEIAFLTIH FQSSIERHKS SHIHVVIACY YGLGISTLLA EKIKQLNHAI QIVDTLKLED 
INNYHFEGID LLITTHDFDT SQLLQIPKVI QVSPLFSDED AKKIEFFVKA MQNPLSKDDI 
LSKIQLSVES NFKLNHSNHI LPIFEKSKEI LDYHHATLDG YIESAIDREK QSSTYIGKGI 
ALPHGNPEKV LKSHMIIFKP SQPITWKQHE VKLVFFLAMS KKDLNINRKI IQSIAQLEED 
DIHQLCLLDD LQLKNTLYAR FKE