| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP2253 |
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| Symbol | |
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| ID | 3242685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | - |
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| Start bp | 2282118 |
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| End bp | 2283362 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 637168934 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_189804 |
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| Protein GI | 57865651 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTAT TATCTAATGA AGAAAGAGTT AAAATCTTAT CCGATATAGT CTCAATAAAA
ACTGTAAATA GCAATGAATT AGAGGTTGCA CATTATTTTA AAAGACTATT TAGTCAGTAT
GGAATTCGTT CACATATTGA TACAGTTACA GATGGTCGAG CAAATTTAAT AGCAACTGTT
GGTTCAAGTC AACCAGTTAT AGGAATATCT GGTCATATGG ATGTAGTATC TGAGGGGAAT
CATGATGATT GGACGTATGA TCCTTTTACA CTCACAGAGA ATCAAGGATA TTTATATGGT
AGAGGTGCTG CGGATATGAA ATCTGGATTA GCAGCTTTAG CCATTGCTCT TATTGAAATT
AAAGAAAGTG GTAAGTTAAC ACAGGGAACT ATTAAATTCA TGGCAACAGT GGGTGAAGAA
ATGGAACAAT CAGGTTCGCA ACAGTTGTTT GAAAAAGGAT ATGCTGATGA TTTAGATGCC
TTACTCATAG CAGAACCATC ATTTCCTAGT TTGGTGTATG CACATAAAGG TTCAATGGAT
TTTAGAATTA AATCTAAGGG ACGTGCATCA CACAGTTCAA TACCATTTTT AGGACAAAAT
GCTATTAAAC CATTATTAGA GTTTATTCAA AATATAAATC AAGAATATGA AAAAATTATG
CAAACAGTAA AAGGTGAGTC CTTAGATTTT TCAAATATGA TTAATAAATT AGAGAATCAA
TTACCTAGCC ATATAACAAA GGAAAAGGCA CAAGAGCTTA TTCAAGGACT TGTTATGACT
AATAGTATTG TTCAAGGGGG AACACAAGTT AATTCAGTAC CTGATTTTGC AACAGCTGAA
TTTAATGTAC GCACAATACC AGAATATAAT AATAACAAAG TTAAAGCGCT ATTTAATGAA
TATATAGAGC AAGCAAATCA CAATGGTGCT AGTTTGACTC AAGAACTTTA TCTTGATTTA
GAACCTGTAG TAACAACAGG TCAAAATCGC TTGGTAGAGC TAGGGTTTGA TATTGCAAAA
AGCCATTTTT CTAACGAAAG AGATTTAATC ATTACTCCTA CTGTAGCAGT TACTGATGCT
TCCAACTTAT TAAAAGGAAA AGATGAAAAT TTTCCATTTT TAATGTTTGG CCCAGGAAAT
GGACCTCATC AAATAAATGA GTGCGTAGAA AAAGCCAATT ATTTAGAATT TGTGGAATAC
TATATAGAGT TTATCACTTC ATATTTAAAT GAAGAGAATG AGTAA
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| Protein sequence | MSVLSNEERV KILSDIVSIK TVNSNELEVA HYFKRLFSQY GIRSHIDTVT DGRANLIATV
GSSQPVIGIS GHMDVVSEGN HDDWTYDPFT LTENQGYLYG RGAADMKSGL AALAIALIEI
KESGKLTQGT IKFMATVGEE MEQSGSQQLF EKGYADDLDA LLIAEPSFPS LVYAHKGSMD
FRIKSKGRAS HSSIPFLGQN AIKPLLEFIQ NINQEYEKIM QTVKGESLDF SNMINKLENQ
LPSHITKEKA QELIQGLVMT NSIVQGGTQV NSVPDFATAE FNVRTIPEYN NNKVKALFNE
YIEQANHNGA SLTQELYLDL EPVVTTGQNR LVELGFDIAK SHFSNERDLI ITPTVAVTDA
SNLLKGKDEN FPFLMFGPGN GPHQINECVE KANYLEFVEY YIEFITSYLN EENE
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