| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP2247 |
|---|
| Symbol | arcD |
|---|
| ID | 3240479 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | - |
|---|
| Start bp | 2274833 |
|---|
| End bp | 2276236 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 637168928 |
|---|
| Product | arginine/ornithine antiporter |
|---|
| Protein accession | YP_189798 |
|---|
| Protein GI | 57865660 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGACA CAGGAGATAA AAAATTAAGT CGAACATCAT TAATCGGTCT TGTTATAGGT
TCGATGATTG GTGGCGGTGC TTTCAATATT CAATCTGATA TGGGAGGCCA CGCTGGAGGA
TTAGCAATTA TAATTGGATG GTTGATTACT GCTATAGGAA TGATTTCATT AGCACTTGTC
TTTCAAAACC TAACTAATGA ACGATCTGAT TTAGATGGTG GTATTTATAG TTATGCTCAA
GCAGGTTTTG GTGATTTTAT AGGGTTTGCA AGTGCTTGGG GATATTGGTT CTCAGCTTTT
TTAGGTAATG TCGCATATGC AACGTTATTA ATGTCTTCTA TAGGGAACTT CTTTCCAATA
TTTAAAGGGG GCAACACATT TCCTAGTATC ATAGTGGCAT CAATATTATT GTGGAGTGTG
CACTTTTTAA TATTAAAAGG AGTTGAGACG GCTACTTTAA TCAATAGTAT TGTCACTATT
ACAAAATTAA TTCCTATCTT ATTAGTGATT ATATGTATGA TTGTAGCCTT TAATTTTAAT
ACATTCAAGA TAGGTTTCTT TGGAATGGAT GGATATGGAT CATTATCATT TCATTTCGCT
AATACGATGT CACAAGTTAA AAGTACGATG TTAGTGACAG TTTGGGTATT TATTGGTATT
GAAGGTGCTG TTGTATTCTC CGGAAGAGCT AAAAATAAAA AAGATGTTGG AACTGCCACT
GTTATCGGAC TTATTTCAGT ATTGCTCATT TACTTCTTGC TGACTGTATT AGCACAAGGT
ATTGTAATTC AAAATCATAT TTCTAAACTT GAGGCACCAT CAATGGCACA AATTTTAGCT
TATATTGTTG GTGATTGGGG AGCAACATTT GTCAATATTG GTCTTATTAT TTCAGTATTA
GGTGCATGGC TAGGTTGGAC ATTACTTGCC GGAGAGTTGC CTTTTATTGT AGCTAAAGAT
GGTTTGTTTC CTAAGTGGTT TGCAAAAGAA AATAAAAATG GGGCACCTAT GAACGCCTTA
TTCATTACTA ATGTGTTAGT TCAAATATTC CTTATTAGTA TGCTGTTTAC CAAAAGTGCT
TATCATTTTG CATTTTCTCT CGCGGCAAGT GCTATACTTT ATCCATACAT GTTCAGTGCG
TTTTATCAGG TGAAATATAC AATAGAACAC AAGTTAACTG CAACGCCTAA ACAATGGATT
ATAGGAATTC TAGCATCTAT TTATGCAATT TGGCTGGTAT ACGCGTCAGG TATAGATTAC
TTGTTACTTA CCATGTTGCT CTATATTCCG GGGATTATCG TCTATATTGT TGTTCAGAAA
AATAATCAAA AGCGACTTAC ACAATTTGAC TATATTTTCT TCAGTCTTAT CGTTATTTTA
GCATTGATAG GGTTATTACG ATGA
|
|---|
| Protein sequence | MNDTGDKKLS RTSLIGLVIG SMIGGGAFNI QSDMGGHAGG LAIIIGWLIT AIGMISLALV
FQNLTNERSD LDGGIYSYAQ AGFGDFIGFA SAWGYWFSAF LGNVAYATLL MSSIGNFFPI
FKGGNTFPSI IVASILLWSV HFLILKGVET ATLINSIVTI TKLIPILLVI ICMIVAFNFN
TFKIGFFGMD GYGSLSFHFA NTMSQVKSTM LVTVWVFIGI EGAVVFSGRA KNKKDVGTAT
VIGLISVLLI YFLLTVLAQG IVIQNHISKL EAPSMAQILA YIVGDWGATF VNIGLIISVL
GAWLGWTLLA GELPFIVAKD GLFPKWFAKE NKNGAPMNAL FITNVLVQIF LISMLFTKSA
YHFAFSLAAS AILYPYMFSA FYQVKYTIEH KLTATPKQWI IGILASIYAI WLVYASGIDY
LLLTMLLYIP GIIVYIVVQK NNQKRLTQFD YIFFSLIVIL ALIGLLR
|
|---|
| |