Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP2216 |
Symbol | |
ID | 3242952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 2252735 |
End bp | 2253673 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637168902 |
Product | ribokinase, putative |
Protein accession | YP_189772 |
Protein GI | 57865611 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.442783 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATT CATCAAGAGA ATATCACCAG ATTAATAGCC AAAAAAAGGT TTTGGTGATC GGCAGTGCTG TTATTGATGT GATTTTAAAT GTTAATAGTA TACCAAGTAG TGGATCAGAC GAATTTGCCC ACTCTGAGAA GACAATAGTA GGTGGTTGCG CATATAATGT AGGCGATATA CTTAGTCAGT TCAAAGCTAA TTATGATTTG ATGGTGCCCG TTGGCGATGG TCTTAATGGA ACAATTATTG AAAATAAGTT AAAAAAAGAA GGCAAAACTT CATTATTAAA TAATATATTA GGTGATAATG GTTGGACGTT ATGTATCGTT GAAAATAATG GGGAACGCAC TTTTTTAACG ATACCTGGAG TTGAAATGAC TTGGAAAAAG AATTGGTTTA AAGAAATTGA TCTTAATAAG TATGATTATA TTTATGTGTC AGGTTATTCT TTTGAACCTC CTTCAGACGA AGTTTTATTA GAAGAATTTA GTCGTTTAAA CGAGAAAACT ACAATTATTT TTGACCCCTC ACCAAGGATT AATAAAATGA ACTGTGAGAG TATAAGGAAG TTGCTTGAAA TAAACACAAT AGTACATGCC AACGAAGGTG AAATATTACA ATTGAGTAGT GAGAATCATG TGAAAGATGC GGCATTAGAA GTAAGTAAAC AGACTAATCA ACCTGTGATA GTTACATTAG GCAACAAAGG TACTCTTATA GCAAATAAGT GTAAAGTTAA GATTTTAGAG GGGGAAAAGG TTCCTGTAAC TGATACTATA GGCGCTGGTG ATTCACACAC AGCAGCTTTT ATAGCAGGTT TGCTAGATAA CCAAAGTATT GAAAAAGCTT GTATATGGGG AAACGAAGTA GCATCTAAAA TTGTGCAAGA ACGAGGTGGA AATACGGATA TATTCAATCC TATAGATAAA GAATATTAA
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Protein sequence | MKNSSREYHQ INSQKKVLVI GSAVIDVILN VNSIPSSGSD EFAHSEKTIV GGCAYNVGDI LSQFKANYDL MVPVGDGLNG TIIENKLKKE GKTSLLNNIL GDNGWTLCIV ENNGERTFLT IPGVEMTWKK NWFKEIDLNK YDYIYVSGYS FEPPSDEVLL EEFSRLNEKT TIIFDPSPRI NKMNCESIRK LLEINTIVHA NEGEILQLSS ENHVKDAALE VSKQTNQPVI VTLGNKGTLI ANKCKVKILE GEKVPVTDTI GAGDSHTAAF IAGLLDNQSI EKACIWGNEV ASKIVQERGG NTDIFNPIDK EY
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