Gene SERP2216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP2216 
Symbol 
ID3242952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp2252735 
End bp2253673 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content33% 
IMG OID637168902 
Productribokinase, putative 
Protein accessionYP_189772 
Protein GI57865611 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.442783 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATT CATCAAGAGA ATATCACCAG ATTAATAGCC AAAAAAAGGT TTTGGTGATC 
GGCAGTGCTG TTATTGATGT GATTTTAAAT GTTAATAGTA TACCAAGTAG TGGATCAGAC
GAATTTGCCC ACTCTGAGAA GACAATAGTA GGTGGTTGCG CATATAATGT AGGCGATATA
CTTAGTCAGT TCAAAGCTAA TTATGATTTG ATGGTGCCCG TTGGCGATGG TCTTAATGGA
ACAATTATTG AAAATAAGTT AAAAAAAGAA GGCAAAACTT CATTATTAAA TAATATATTA
GGTGATAATG GTTGGACGTT ATGTATCGTT GAAAATAATG GGGAACGCAC TTTTTTAACG
ATACCTGGAG TTGAAATGAC TTGGAAAAAG AATTGGTTTA AAGAAATTGA TCTTAATAAG
TATGATTATA TTTATGTGTC AGGTTATTCT TTTGAACCTC CTTCAGACGA AGTTTTATTA
GAAGAATTTA GTCGTTTAAA CGAGAAAACT ACAATTATTT TTGACCCCTC ACCAAGGATT
AATAAAATGA ACTGTGAGAG TATAAGGAAG TTGCTTGAAA TAAACACAAT AGTACATGCC
AACGAAGGTG AAATATTACA ATTGAGTAGT GAGAATCATG TGAAAGATGC GGCATTAGAA
GTAAGTAAAC AGACTAATCA ACCTGTGATA GTTACATTAG GCAACAAAGG TACTCTTATA
GCAAATAAGT GTAAAGTTAA GATTTTAGAG GGGGAAAAGG TTCCTGTAAC TGATACTATA
GGCGCTGGTG ATTCACACAC AGCAGCTTTT ATAGCAGGTT TGCTAGATAA CCAAAGTATT
GAAAAAGCTT GTATATGGGG AAACGAAGTA GCATCTAAAA TTGTGCAAGA ACGAGGTGGA
AATACGGATA TATTCAATCC TATAGATAAA GAATATTAA
 
Protein sequence
MKNSSREYHQ INSQKKVLVI GSAVIDVILN VNSIPSSGSD EFAHSEKTIV GGCAYNVGDI 
LSQFKANYDL MVPVGDGLNG TIIENKLKKE GKTSLLNNIL GDNGWTLCIV ENNGERTFLT
IPGVEMTWKK NWFKEIDLNK YDYIYVSGYS FEPPSDEVLL EEFSRLNEKT TIIFDPSPRI
NKMNCESIRK LLEINTIVHA NEGEILQLSS ENHVKDAALE VSKQTNQPVI VTLGNKGTLI
ANKCKVKILE GEKVPVTDTI GAGDSHTAAF IAGLLDNQSI EKACIWGNEV ASKIVQERGG
NTDIFNPIDK EY