| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP2210 |
|---|
| Symbol | |
|---|
| ID | 3241546 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | - |
|---|
| Start bp | 2245847 |
|---|
| End bp | 2248180 |
|---|
| Gene Length | 2334 bp |
|---|
| Protein Length | 777 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 637168896 |
|---|
| Product | glycosyl transferase, group 1 family protein |
|---|
| Protein accession | YP_189766 |
|---|
| Protein GI | 57865597 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1887] Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.918603 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATTA ACATATTTGG ATATAATATC TTCGCCAAGG GCGGAACATC AAGAAGTAAT
ATTAACTTAG TGAAAAGCTT ATTAGAAATT GGACATGAGG TACACTACTT TAATTATCAG
GACTATAATA AAAGTGATAT CACAAAACTA ATTATTTACG AAGGTTTGAG CACAAAGCAT
CTTCATATTC ATCAATTTAA TAGTGGAAAA GAACTTGCTC ATGGAGACCT ACTTATAATT
ACTAGAGAAA CCTTTTTTAA TCATGCATAT CTAGTTAAAA AATTAAATAG CAAGATTAAG
ATTGTTGGTG AAATACATGG TCCATTGGAA TATATTAATG AGAATATAGA TTTAGCATTA
GACTGTATTG ATTGTGTTCG AGTGAGTACA GCTAGAATTA AAAATGAATT TATAGCTAAA
TATGACTATC ATCGGGTTTT TAATCAATAC GTAAATGCAC AACATATCGA TTTAAAATCA
GAGCCGATAA ATACTAAACG AAATTTTTTA ATTAAAGCAC GTTTTGAGGA TGAAGTTAAA
GATATTTCAT ATATTATTAA ATTGTTTAAT TACATCATTA AAAACCAAAT TGTTGATGAT
GCTCAACTTT ATTTAATAGG ATATGGACCT TCAGAAATGC TTTACAAAAA TTTGATAAAT
TACTATCATC TTAATGATTA TATTCATATT AATGAAAAAG AACCACAGAG TTATATTTAT
GTATCTAGTT CGCCATATGA AACGCTCGGC TATTCTATAT TAGAAACGAT TGCACAGGGT
AATAAAGCTC TAGTTTACTA TGGTGATGAT AACGTGTTAA AGGATATCTA TGCACCATAT
GAAGCGATAC GTTTTTTAAC CAAAGATATG ATTAAAGATA GTAAAATAAT TAAAGACTTT
CTAAACTATA AATATAGTCA CTGTGATCGA CAAAAAGATT ATCGACAGTT GAAAAGTACG
TTTAAATGCA TTAATTATGG ACAGGAATTT TTAAATAATG TTGAAACTTT CTCTTCATCT
CAACATGTAA AAGTGAAGAA AATTCATCGA CATCTCGGTA GTGAAAAACA AATAGATATA
GCAAGTCGTT TAAAAGAGAG TCGTTGGATG AATTTAATTA GAAAAAATAA ATATTTATTT
AATAAATGTA AAACGTACTA TGAAAAAAGA ACGCATATGA GCTATATCAA AAATTTAAAT
CAAATACCTG TAGACGACGA TTCAATATTT ATAGAGTCTT TCCATGGCAA GAATTTTAGT
GGAGATCCTA AATATATTGC TCTTGCTATT AAGAGACAGT ATGATCATAA AAAAATATAT
GTGAGTTCAA CCAATTCACT TGTTGATATG GAAATCAAAC GTTACGGTTT TACACCTGTT
CGATTTGGAA GCGAGAAATA TATTAAAACG TTTAGAAAGT GTAAGTATGT TTTTATCAAT
GGTAACTCGT GGGATAAAGT GTACAAGTCT TCAGATCAGA TATTTATTCA AACATGGCAC
GGTTTTCCAT TAAAGAAAAT GGTTAATGAT TTAAATGAAC AACATGAAAG ACAACAACAA
CTAGAGGCAT TCATACCACG CATGAAAAAA TGGGATTACA TTTTGACATC ATCAGATATT
AATACGACGT TGTTGGAATC TGCTTTTATG CTAAATAAAA ATCCAAATCT TAAAGTTCTA
GAATACGGCG CACCTAAGAA TGAATATTTA ATAAATAATA ATAATTTACA AGAGCGCCAG
CAGTTACAGC TTAAATATAT GTATAAGATA GATGATGATA AAAAATATAT ATTATATTGT
CCCACTTGGA GGGAAAATCA AAGAAAAGAA GTCACTCAGA TTAATTTAAA AGATTTACTT
AAATATTTAC CAGAGAATTA TGAGATTATT GTGAAACTTC ATCCTAATGA AAGTCATTTA
AGAACCAGAT ATAATCAAAT AGATAATCGA ATTCACTGTT ATTTCAATGA ACTTGTTGAT
ATTCAAGAAC TGTATATTCT GAGTGAATGT ATGATTACAG ATTACTCGTC GACCATTTTT
GACTATATAC ATTTAAACAA GCCAGTCTTT ATTCTTCAAG AAGACGAGCA ACAATATAAA
CAAAGTGTTG GTTTTTATTT TGATTTGTTT GAAGTGGGTG ATTTTCTTAA AGCCTCTTTA
AATGAACGCA TGTTAGCTAA ACAAATTTGT AGCACTGATT ATATAAATTA TTCAAAAGTG
GTTCATCGTT TGATGAAACA AGATAGTTCG AAAAGCAGTG AAAAGTTAAT GGCCGAAATT
CTTGGGGAAC CAGAATATCC AAGTTCATCA AACTGCAAAC AACAGATTTC TTAA
|
|---|
| Protein sequence | MKINIFGYNI FAKGGTSRSN INLVKSLLEI GHEVHYFNYQ DYNKSDITKL IIYEGLSTKH
LHIHQFNSGK ELAHGDLLII TRETFFNHAY LVKKLNSKIK IVGEIHGPLE YINENIDLAL
DCIDCVRVST ARIKNEFIAK YDYHRVFNQY VNAQHIDLKS EPINTKRNFL IKARFEDEVK
DISYIIKLFN YIIKNQIVDD AQLYLIGYGP SEMLYKNLIN YYHLNDYIHI NEKEPQSYIY
VSSSPYETLG YSILETIAQG NKALVYYGDD NVLKDIYAPY EAIRFLTKDM IKDSKIIKDF
LNYKYSHCDR QKDYRQLKST FKCINYGQEF LNNVETFSSS QHVKVKKIHR HLGSEKQIDI
ASRLKESRWM NLIRKNKYLF NKCKTYYEKR THMSYIKNLN QIPVDDDSIF IESFHGKNFS
GDPKYIALAI KRQYDHKKIY VSSTNSLVDM EIKRYGFTPV RFGSEKYIKT FRKCKYVFIN
GNSWDKVYKS SDQIFIQTWH GFPLKKMVND LNEQHERQQQ LEAFIPRMKK WDYILTSSDI
NTTLLESAFM LNKNPNLKVL EYGAPKNEYL INNNNLQERQ QLQLKYMYKI DDDKKYILYC
PTWRENQRKE VTQINLKDLL KYLPENYEII VKLHPNESHL RTRYNQIDNR IHCYFNELVD
IQELYILSEC MITDYSSTIF DYIHLNKPVF ILQEDEQQYK QSVGFYFDLF EVGDFLKASL
NERMLAKQIC STDYINYSKV VHRLMKQDSS KSSEKLMAEI LGEPEYPSSS NCKQQIS
|
|---|
| |