| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP2115 |
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| Symbol | |
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| ID | 3242484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | - |
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| Start bp | 2139898 |
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| End bp | 2141637 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637168801 |
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| Product | pyruvate oxidase |
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| Protein accession | YP_189671 |
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| Protein GI | 57865546 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | [TIGR02720] pyruvate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.100527 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACAAA TTAAAGCAAA TGAAGCATTA GTTAAGGCAT TACAAACCTG GAATATTGAT
CATTTATATG GTATTCCTGG CGACTCAGTA GATGCTGTTG TTGATAGCTT ACGTACGGTC
AGAGATCAAT TTAAATTCTA TCACGTACGT CATGAAGAGG TAGCGAGTTT AGCTGCTGCA
AGTTACACAA AAATGACAGG GAAAATTGGT GTAGCTTTAA GTATCGGAGG ACCTGGTATT
GTACACTTAT TAAATGGTAT GTACGATGCT AAAATGGATA ATGTACCTCA ACTTATTATT
GCTGGACAAA CAAATAGTAC ATTATTAGGT ACAAAATTCT TCCAAGAGAC AAACATTTCT
AAAATGGTTG ATGATGTTGC TGTATATCAC CACCAAATTC AAAAAGGTGA TAACGTATTT
GAAATTACAA ATGAAGCAAT TCGTACGGCA TACGAGAAAA AAGGTGTCTC TGTTATCATT
TGTCCAAATG ACTTATTAAC TCAAAAAATT AAAGACACTA CAAATCGTGC AGTTGATACA
ACTAAACCAA AACCAGCTTC ACCAAAATTC AAAAGTATTA AAAAAGCAGC TAAATTAATT
GATAAAGCTA AAAAACCAGT AATGCTTATT GGTTTAGGTA CACAACACGC TAAAGATGAA
TTACGTGAAT TTATTGAAGC TGCAAAAATT CCAGTTATTC ACACATTACC TGCAAAAACA
ATCTTACCTG ACGATCATCC TTATAGTATT GGTAACTTAG GTAAAATTGG TACTAAAACA
TCTTATCAAA CAATTCAAGA TGCAGACTTA TTAATTATGG CTGGTACGAA CTATCCGTAT
GTTAACTATT TACCTAAGAA AAACATTAAA GCTATTCAAA TCGATACGAA CGAAGAAAAT
ATTGGTGCAC GCTTTAAAAT TAATGTAGGT ATTTTAGGTG ATAGTAAAGT TGCTTTCCAT
CAACTAACTG AAAACATTAA GCATGTTGCA AAACGTCCAT TCTTAGATAA GACATTAGAA
CGTAAAGCAG TTTGGGATAA ATGGATGAAA CAAGATTTGA ATAATGACAA TTCACCATTA
CGTCCAGAAC GTTTAATGAA AGCAATCAAT GCTAACTTAA AAGATGATGC AATTATCTCA
GCAGATGTTG GTACTTCTAC AGTATGGTCT ACGCGTTACT TAAACTTATC TGTAAATAAT
AAATTCATTA TTTCTAGTTG GTTAGGTACT ATGGGCTGTG GTTTACCAGG TGCGATGGCA
GCTAAAATTG CTTATCCAAA CCGTCAAGCA GTAGCTATCA CAGGTGACGG TGCGTTCCAA
ATGGTAATGC AAGACTTTGC TACAGCTGTT CAATATAACT TACCAATGAC AATCTTCGTA
TTAAATAACA AACAATTGTC ATTCATTAAA TATGAACAAC AAGCTGCTGG TGAATTAGAG
TATGCCATTG ATTTCTCTGA TATGGATCAT GCTAAATTTG CTGAAGCTGC TGGTGGTAAA
GGCTATGTTG TGAGAGATGT AAGTCGTCTT GACGACATCG TTGAAGAGGC AATGGCTCAA
GATGTTCCAA CAATCGTTGA TGTTCATGTT GATCCTAATG CTGCACCATT ACCAGGTAAA
ATTGTAAACG AAGAAGCATT TGGTTACAGT AAATGGGCTT ATAGATCAAT TACTGAAGAT
AAAAACTTAG ACTTTGATCA AATCCCACCA ATCTCTGTAG CAGCTAAACG TTTCTTATAA
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| Protein sequence | MAQIKANEAL VKALQTWNID HLYGIPGDSV DAVVDSLRTV RDQFKFYHVR HEEVASLAAA
SYTKMTGKIG VALSIGGPGI VHLLNGMYDA KMDNVPQLII AGQTNSTLLG TKFFQETNIS
KMVDDVAVYH HQIQKGDNVF EITNEAIRTA YEKKGVSVII CPNDLLTQKI KDTTNRAVDT
TKPKPASPKF KSIKKAAKLI DKAKKPVMLI GLGTQHAKDE LREFIEAAKI PVIHTLPAKT
ILPDDHPYSI GNLGKIGTKT SYQTIQDADL LIMAGTNYPY VNYLPKKNIK AIQIDTNEEN
IGARFKINVG ILGDSKVAFH QLTENIKHVA KRPFLDKTLE RKAVWDKWMK QDLNNDNSPL
RPERLMKAIN ANLKDDAIIS ADVGTSTVWS TRYLNLSVNN KFIISSWLGT MGCGLPGAMA
AKIAYPNRQA VAITGDGAFQ MVMQDFATAV QYNLPMTIFV LNNKQLSFIK YEQQAAGELE
YAIDFSDMDH AKFAEAAGGK GYVVRDVSRL DDIVEEAMAQ DVPTIVDVHV DPNAAPLPGK
IVNEEAFGYS KWAYRSITED KNLDFDQIPP ISVAAKRFL
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