Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP2114 |
Symbol | |
ID | 3242483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 2137627 |
End bp | 2139654 |
Gene Length | 2028 bp |
Protein Length | 675 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637168800 |
Product | PTS system, IIABC components |
Protein accession | YP_189670 |
Protein GI | 57865545 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific [COG1264] Phosphotransferase system IIB components [COG2190] Phosphotransferase system IIA components |
TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component [TIGR00830] PTS system, glucose subfamily, IIA component [TIGR02002] PTS system, glucose-specific IIBC component |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000024561 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAAA AGCTATTTGG TCAAATGCAA CGTATCGGTA AAGCTTTAAT GTTACCAGTT GCGATTTTAC CGGCTGCAGG GTTGCTATTA GCAATTGGGA CTGCGTTTCA AGGCGAAGCG TTACAACATT ATCTTCCATT TATAAAAAAT GATATTGTTC AACAAATCGC TAATATGCTT ACAGGTGCTG GTGGTATTAT ATTTGATAAT CTACCTATTA TCTTTGCTTT AGGTGTAGCA ATTGGTCTTG CAGGTGGAGA TGGTGTAGCT GCTATTGCTG CATTTGTTGG TTTTATCATT TTAAATAAAA CAATGGGGGC TTTCTTGCAT GTAACTCCAG ATAAATTATC TGATCCAACT AATGGATATG CAAATGTATT AGGGATTCCT ACACTTCAAA CAGGTGTGTT CGGAGGTATT ATTATTGGTG CACTAGCAGC CTGGTGTTAT AACAAATTCT ATAATATTAC CTTACCATCA TATTTAGGAT TCTTTGCAGG TAAACGTTTT GTACCAATTA TGATGGCAAC AACATCTTTC ATTTTAGCCT TTCCGATGGC AATTATTTGG CCAACGATTC AAAACGGTTT AAATGCATTT AGTGAGGGGT TATTAGATTC AAATACAGGT TTAGCTGTAT TTTTATTTGG ATTTATTAAG CGATTATTAA TACCATTTGG TTTACATCAC ATTTTCCATG CACCATTCTG GTTTGAATTT GGTTCTTGGA AAAATGCTGC TGGAGAGATA ATTAGAGGCG ACCAACGTAT TTTTATTGAA CAAATCCGTG AAGGTGCTCA TTTAACTTCT GGTAAATTCA TGCAAGGGGA ATTCCCAGTC ATGATGTTTG GATTACCAGC TGCAGCATTG GCTATTTATC AAACAGCAAA ACCTGAGAAT AAGAAAGTAG TTGCAGGTTT AATGATTTCT GCTGCATTAA CATCATTTTT AACTGGTATT ACTGAACCAT TAGAATTCTC ATTCTTATTT GTAGCACCAT TCTTATTCGT AATTCATGCA GTATTAGATG GTTTATCATT CTTGACACTA TACTTGTTAA ATGTACATTT AGGATATACT TTCTCTGGAG GATTTATAGA TTATGTTTTA TTAGGTATTC TACCTAATAA AACAGCATGG TGGCTTGTCA TCCCAGTAGG TATTATTTAT GCAGTGATTT ACTACTTTGT ATTTAGATTC CTTATTGTTA AATTTAACTA TAAAACACCA GGTCGTGAAG ATAAAAAATC ATCTGTAACA ACTACATCGG CTAGTCAACT GCCATTCGAT GTTTTGAAAG CAATGGGTGG TAAAGAAAAT ATTAAACATC TAGATGCTTG TATTACTAGA CTAAGAGTAG AAGTAAATGA AAAATCAAAA GTTGATGTTG CCGGCCTTAA ATCATTAGGT GCTTCAGGAG TACTTGAAGT CGGTAACAAT ATGCAAGCTA TTTTCGGTCC TAAATCTGAT CAAATCAAAC ATGATATGGC TAAGATAATA AGTGGAGAAA TTACAAAACC AAGTGAAACA ACAATTGATG AAGAAGTGTC AGATGATCCT GTACATGTGG AAGATATTGT AGAAACAGAA ATTTACGCAC CTGGACATGG TGAGATAATA CCGTTATCTG AAGTACCTGA TAAAGTTTTC TCTGAAAAGA TGATGGGTGA TGGTATCGGA TTTGTACCAG ATTCAGGAGA AATTGTAGCA CCATTTGATG GTACAGTTAA AACAATTTTC CCTACAAAAC ATGCGATAGG ATTGGAGTCT GATAGTGGTG TTGAAGTGTT AATTCACATT GGTATCGATA CAGTTAAATT AAATGGTGAA GGTTTTGAAA GTTTGGTAAA TACTGATGAA CCAGTAACAC AAGGTCAACC ATTAATGAAG ATTGATTTAG AATACTTAAA GGAACATGCT CCAAGTATTA TTACACCAGT AATCATAACA AACCAAGAAG ACAAAACATT AACAATTGAA GATGTAAAAC AAGTCGATCC TGGTAAAGCG ATTATGACAA TTAAATAA
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Protein sequence | MFKKLFGQMQ RIGKALMLPV AILPAAGLLL AIGTAFQGEA LQHYLPFIKN DIVQQIANML TGAGGIIFDN LPIIFALGVA IGLAGGDGVA AIAAFVGFII LNKTMGAFLH VTPDKLSDPT NGYANVLGIP TLQTGVFGGI IIGALAAWCY NKFYNITLPS YLGFFAGKRF VPIMMATTSF ILAFPMAIIW PTIQNGLNAF SEGLLDSNTG LAVFLFGFIK RLLIPFGLHH IFHAPFWFEF GSWKNAAGEI IRGDQRIFIE QIREGAHLTS GKFMQGEFPV MMFGLPAAAL AIYQTAKPEN KKVVAGLMIS AALTSFLTGI TEPLEFSFLF VAPFLFVIHA VLDGLSFLTL YLLNVHLGYT FSGGFIDYVL LGILPNKTAW WLVIPVGIIY AVIYYFVFRF LIVKFNYKTP GREDKKSSVT TTSASQLPFD VLKAMGGKEN IKHLDACITR LRVEVNEKSK VDVAGLKSLG ASGVLEVGNN MQAIFGPKSD QIKHDMAKII SGEITKPSET TIDEEVSDDP VHVEDIVETE IYAPGHGEII PLSEVPDKVF SEKMMGDGIG FVPDSGEIVA PFDGTVKTIF PTKHAIGLES DSGVEVLIHI GIDTVKLNGE GFESLVNTDE PVTQGQPLMK IDLEYLKEHA PSIITPVIIT NQEDKTLTIE DVKQVDPGKA IMTIK
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