| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP2114 |
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| Symbol | |
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| ID | 3242483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | - |
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| Start bp | 2137627 |
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| End bp | 2139654 |
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| Gene Length | 2028 bp |
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| Protein Length | 675 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637168800 |
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| Product | PTS system, IIABC components |
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| Protein accession | YP_189670 |
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| Protein GI | 57865545 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
[COG1264] Phosphotransferase system IIB components
[COG2190] Phosphotransferase system IIA components |
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| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component
[TIGR00830] PTS system, glucose subfamily, IIA component
[TIGR02002] PTS system, glucose-specific IIBC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000024561 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAAAA AGCTATTTGG TCAAATGCAA CGTATCGGTA AAGCTTTAAT GTTACCAGTT
GCGATTTTAC CGGCTGCAGG GTTGCTATTA GCAATTGGGA CTGCGTTTCA AGGCGAAGCG
TTACAACATT ATCTTCCATT TATAAAAAAT GATATTGTTC AACAAATCGC TAATATGCTT
ACAGGTGCTG GTGGTATTAT ATTTGATAAT CTACCTATTA TCTTTGCTTT AGGTGTAGCA
ATTGGTCTTG CAGGTGGAGA TGGTGTAGCT GCTATTGCTG CATTTGTTGG TTTTATCATT
TTAAATAAAA CAATGGGGGC TTTCTTGCAT GTAACTCCAG ATAAATTATC TGATCCAACT
AATGGATATG CAAATGTATT AGGGATTCCT ACACTTCAAA CAGGTGTGTT CGGAGGTATT
ATTATTGGTG CACTAGCAGC CTGGTGTTAT AACAAATTCT ATAATATTAC CTTACCATCA
TATTTAGGAT TCTTTGCAGG TAAACGTTTT GTACCAATTA TGATGGCAAC AACATCTTTC
ATTTTAGCCT TTCCGATGGC AATTATTTGG CCAACGATTC AAAACGGTTT AAATGCATTT
AGTGAGGGGT TATTAGATTC AAATACAGGT TTAGCTGTAT TTTTATTTGG ATTTATTAAG
CGATTATTAA TACCATTTGG TTTACATCAC ATTTTCCATG CACCATTCTG GTTTGAATTT
GGTTCTTGGA AAAATGCTGC TGGAGAGATA ATTAGAGGCG ACCAACGTAT TTTTATTGAA
CAAATCCGTG AAGGTGCTCA TTTAACTTCT GGTAAATTCA TGCAAGGGGA ATTCCCAGTC
ATGATGTTTG GATTACCAGC TGCAGCATTG GCTATTTATC AAACAGCAAA ACCTGAGAAT
AAGAAAGTAG TTGCAGGTTT AATGATTTCT GCTGCATTAA CATCATTTTT AACTGGTATT
ACTGAACCAT TAGAATTCTC ATTCTTATTT GTAGCACCAT TCTTATTCGT AATTCATGCA
GTATTAGATG GTTTATCATT CTTGACACTA TACTTGTTAA ATGTACATTT AGGATATACT
TTCTCTGGAG GATTTATAGA TTATGTTTTA TTAGGTATTC TACCTAATAA AACAGCATGG
TGGCTTGTCA TCCCAGTAGG TATTATTTAT GCAGTGATTT ACTACTTTGT ATTTAGATTC
CTTATTGTTA AATTTAACTA TAAAACACCA GGTCGTGAAG ATAAAAAATC ATCTGTAACA
ACTACATCGG CTAGTCAACT GCCATTCGAT GTTTTGAAAG CAATGGGTGG TAAAGAAAAT
ATTAAACATC TAGATGCTTG TATTACTAGA CTAAGAGTAG AAGTAAATGA AAAATCAAAA
GTTGATGTTG CCGGCCTTAA ATCATTAGGT GCTTCAGGAG TACTTGAAGT CGGTAACAAT
ATGCAAGCTA TTTTCGGTCC TAAATCTGAT CAAATCAAAC ATGATATGGC TAAGATAATA
AGTGGAGAAA TTACAAAACC AAGTGAAACA ACAATTGATG AAGAAGTGTC AGATGATCCT
GTACATGTGG AAGATATTGT AGAAACAGAA ATTTACGCAC CTGGACATGG TGAGATAATA
CCGTTATCTG AAGTACCTGA TAAAGTTTTC TCTGAAAAGA TGATGGGTGA TGGTATCGGA
TTTGTACCAG ATTCAGGAGA AATTGTAGCA CCATTTGATG GTACAGTTAA AACAATTTTC
CCTACAAAAC ATGCGATAGG ATTGGAGTCT GATAGTGGTG TTGAAGTGTT AATTCACATT
GGTATCGATA CAGTTAAATT AAATGGTGAA GGTTTTGAAA GTTTGGTAAA TACTGATGAA
CCAGTAACAC AAGGTCAACC ATTAATGAAG ATTGATTTAG AATACTTAAA GGAACATGCT
CCAAGTATTA TTACACCAGT AATCATAACA AACCAAGAAG ACAAAACATT AACAATTGAA
GATGTAAAAC AAGTCGATCC TGGTAAAGCG ATTATGACAA TTAAATAA
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| Protein sequence | MFKKLFGQMQ RIGKALMLPV AILPAAGLLL AIGTAFQGEA LQHYLPFIKN DIVQQIANML
TGAGGIIFDN LPIIFALGVA IGLAGGDGVA AIAAFVGFII LNKTMGAFLH VTPDKLSDPT
NGYANVLGIP TLQTGVFGGI IIGALAAWCY NKFYNITLPS YLGFFAGKRF VPIMMATTSF
ILAFPMAIIW PTIQNGLNAF SEGLLDSNTG LAVFLFGFIK RLLIPFGLHH IFHAPFWFEF
GSWKNAAGEI IRGDQRIFIE QIREGAHLTS GKFMQGEFPV MMFGLPAAAL AIYQTAKPEN
KKVVAGLMIS AALTSFLTGI TEPLEFSFLF VAPFLFVIHA VLDGLSFLTL YLLNVHLGYT
FSGGFIDYVL LGILPNKTAW WLVIPVGIIY AVIYYFVFRF LIVKFNYKTP GREDKKSSVT
TTSASQLPFD VLKAMGGKEN IKHLDACITR LRVEVNEKSK VDVAGLKSLG ASGVLEVGNN
MQAIFGPKSD QIKHDMAKII SGEITKPSET TIDEEVSDDP VHVEDIVETE IYAPGHGEII
PLSEVPDKVF SEKMMGDGIG FVPDSGEIVA PFDGTVKTIF PTKHAIGLES DSGVEVLIHI
GIDTVKLNGE GFESLVNTDE PVTQGQPLMK IDLEYLKEHA PSIITPVIIT NQEDKTLTIE
DVKQVDPGKA IMTIK
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