| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP2090 |
|---|
| Symbol | |
|---|
| ID | 3241784 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | + |
|---|
| Start bp | 2117387 |
|---|
| End bp | 2117881 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 637168776 |
|---|
| Product | phosphinothricin acetyltransferase, putative |
|---|
| Protein accession | YP_189646 |
|---|
| Protein GI | 57865498 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1247] Sortase and related acyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAGAT TTGCACGACT AGAAGATCTT CAAGATATTT TGACAATTTA TAATGATGCC
ATCCTTAATA CAACAGCTGT TTATACGTAT AAGCCACAAC AATTAGATGA ACGTCTTCAA
TGGTATCAAT CTAAAGCAAA AATAAACGAA CCTATATGGG TTTATGAAAA AGAAGGGAAA
GTAGTTGGTT TTGCCACTTA TGGTTCCTTT AGACAATGGC CGGCCTATTT ATATACTATT
GAACATTCTA TATATGTTCA TCAACAGTAC AGAGGACTAG GTATCGCTTC TCAATTATTA
GAGAATTTAA TTCGTTACGC TAAAGAACAA GGTTATCGCA CCATTGTTGC TGGGATTGAT
GCATCGAACA TGGATAGTAT CGCATTGCAT AAGAAGTTTG ACTTCTCACA TGCAGGTACA
ATTAAAAATG TAGGTTATAA ATTTGATCGA TGGCTCGATT TATCATTTTA TCAATATGAT
TTATCTGATT CATAA
|
|---|
| Protein sequence | MIRFARLEDL QDILTIYNDA ILNTTAVYTY KPQQLDERLQ WYQSKAKINE PIWVYEKEGK
VVGFATYGSF RQWPAYLYTI EHSIYVHQQY RGLGIASQLL ENLIRYAKEQ GYRTIVAGID
ASNMDSIALH KKFDFSHAGT IKNVGYKFDR WLDLSFYQYD LSDS
|
|---|
| |