Gene SERP2089 details

Gene Information

• Locus tag: SERP2089
• Symbol: srtA
• ID: 3241783
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Staphylococcus epidermidis RP62A
• Kingdom: Bacteria
• Replicon accession: NC_002976
• Strand: -
• Start bp: 2116600
• End bp: 2117211
• Gene Length: 612 bp
• Protein Length: 203 aa
• Translation table: 11
• GC content: 31%
• IMG OID: 637168775
• Product: sortase
• Protein accession: YP_189645
• Protein GI: 57865497
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3764] Sortase (surface protein transpeptidase)
• TIGRFAM ID: [TIGR01076] LPXTG-site transpeptidase (sortase) family protein

Plasmid Coverage information

• Num covering plasmid clones: 36
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCAGT GGATGAATAG ATTAATCACC TTAATAGGCG TATTGTTAAT CATTTTAGCT 
ATTTATTTAT TCTCAAAGCC ATATATCGAT AATTATCTAC ATGAAAAAGA TAACGATCAT 
AAAATTGAAA ATTATGATAA AAAGGAAAAA GAACAGACAA AGACATCTAA ATCGACGCCA 
AAGATACCTT CCGATAAATC TAAAATGGCT GGTTATATAG AAGTTCCAGA TGCACAAATA 
AAAGAACCAG TATACCCTGG TCCAGCAACA CCAGAACAAC TCAATAGAGG TGTTAGTTTT 
GCAGAAGGTG ACGAATCTCT TAATCAACAG AATATTTCAA TTGCTGGTCA TACGTTTACA 
GATCGTTCGC ACTATCAATT TACAAATTTA AAATCAGCCA AAATCGGTAG TAAAGTGTAT 
TTTAAAACTG GAAATCAAAC TAGAAAGTAT AAAATAACTA AAATACGTGA TGTTAAGCCT 
ACAGAGGTTA AGGTATTAGA CGAACATCCT AATAAGAAAA ATCAATTAAC ATTAATTACT 
TGCGATGACT ATAACGAAGA AACGGGTGTT TGGGAAACAA GGAAAATATT CATAGCTACA 
CAAATTAACT AA 

 

Protein sequence

MKQWMNRLIT LIGVLLIILA IYLFSKPYID NYLHEKDNDH KIENYDKKEK EQTKTSKSTP 
KIPSDKSKMA GYIEVPDAQI KEPVYPGPAT PEQLNRGVSF AEGDESLNQQ NISIAGHTFT 
DRSHYQFTNL KSAKIGSKVY FKTGNQTRKY KITKIRDVKP TEVKVLDEHP NKKNQLTLIT 
CDDYNEETGV WETRKIFIAT QIN