| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP2083 |
|---|
| Symbol | |
|---|
| ID | 3242374 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | + |
|---|
| Start bp | 2109745 |
|---|
| End bp | 2110542 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637168769 |
|---|
| Product | glyoxalase family protein |
|---|
| Protein accession | YP_189639 |
|---|
| Protein GI | 57865483 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2514] Predicted ring-cleavage extradiol dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAATT TTCATTCTAT AGATGCTACA CAAGTAACAA ACGTCACTTT AAATGTTAAA
GATTTAAATA AATTAACTGA TTTCTATTCT AATGTATTAG GTTTTTCTAT TGAAAAACAA
ACGAATCAAC AAACCGTATT CAACATCGGA AATCTTGGTT ATACTTTAAC TTTAAATGAA
CTTAACAACG GTCGACAACC GGAATTTAGA GAAGCAGGGT TATTCCATGT TGCTTATCTT
TTACCGACTC GTAGCGATTT AGCAGACTTC CTTTATCATG CTAACAATCT CAACATCGCA
ATGGGTGGTG GAGATCACCT TGTCAGTGAA GCGCTATATT TCACTGATCC TGAAGGCAAT
GGTATTGAAG TCTATCATGA TCGCCCTTCA GAAGACTGGG TGTGGCGAGA CGGTTTTGTC
AAAATGGATA CATTGGAAGT TGATGTCAAT GATTTAATGA CTCAACGGTC AAATGAAGGT
TGGCAAGGTT GGTCGGAAGA AGGAAAAATC GGGCATTTAC ATCTCAAAAC ACACAATTTA
GAATCTGCTT ATGCATTTTA TGTTGAAAAG TTAGGGTTCG AACATATATC TAATTTCCCA
CAAGCACTAT TTATGTCCAC TCAAAAGTAT CATCATCATA TAGCTACAAA TTCTTGGCAG
TCAAATAAGA TTAGAACTCA AAATGAACAA ACTTATGGTT TATGTCACTT TGACATATAT
CAACCTAATG CAAATACTAC TCATGTTACT TCACCTGAAG GCTTTGACAT TACAATTCAT
GGTAACGAAA TAAAATAA
|
|---|
| Protein sequence | MTNFHSIDAT QVTNVTLNVK DLNKLTDFYS NVLGFSIEKQ TNQQTVFNIG NLGYTLTLNE
LNNGRQPEFR EAGLFHVAYL LPTRSDLADF LYHANNLNIA MGGGDHLVSE ALYFTDPEGN
GIEVYHDRPS EDWVWRDGFV KMDTLEVDVN DLMTQRSNEG WQGWSEEGKI GHLHLKTHNL
ESAYAFYVEK LGFEHISNFP QALFMSTQKY HHHIATNSWQ SNKIRTQNEQ TYGLCHFDIY
QPNANTTHVT SPEGFDITIH GNEIK
|
|---|
| |