Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP2043 |
Symbol | |
ID | 3242498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 2064057 |
End bp | 2065133 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637168729 |
Product | M42 family peptidase |
Protein accession | YP_189599 |
Protein GI | 57865429 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1363] Cellulase M and related proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCAGAAT CTAAAGCGTT ACTTAAATCT TTAACAGATG TTAATGGTAT TTCTGGACAT GAAATGCAAG TTAAATCTTT AATGAAAGAT TATTTAACAC CTGTGAGCGA TGATATCGTT GAAGACCAAT TAGGTGGTAT TTTTGGTAAA AAGAATGCTA CTCATGGAAC TAAATCTTTA ATGATTTCTG GCCATTTAGA TGAAATTGGC TTTATCGTTA CACAAATTGA TGAACAAGGA TACATTTATT TCACGCCAAT TGGTGGATGG TGGAATCAAG TCATGTTATC TCAAAAAGTG ACGATTACTA CTGAAAGTGG CAAAGAGATA CGTGGAATTA TTGGTTCTAA ACCTCCACAC GCCCTCTCGT CGGAAGAACG CAAAAAACCA GTTGATATTA AAAATATGTA CATCGATATT GGTGTGCGTA ATAAAGAAGA AGCGAAAGAA GCGGGAATCG AATTAGGTAA TATGATTACA CCTTATAGCG AATTTGAATC ATTAGCGAAT GATAAATACT TAACTGCTAA AGCTTTTGAT AATCGCTATG GATGTGCACT CGCTGTTGAA GTACTTCAAC AACTAAAAGA TGAAAACATA GACATCAATT TATATGCCGG TGCAACTGTA CAAGAAGAAG TAGGTTTACG TGGTGCTAAA GTTGCAGCAA ATTTGATTAA ACCTGATTTA GCAATTGCGG TGGACGTCGG GGTTGCATAC GATGTTCCAG GTATGACGAG TGAAAAAAAT GAAGGTAAGT TGGGCGATGG TCCATTAGCA ATATTGATGG ATGCCACTAG TATCGCTCAC GATGGTTTGC GCAAACATAT TAAAGACGTT GCTGAGCATC ATAATATTCC AGTACAGTGG GCAACAACAC CTGGTGGTGG TACAGATGCA GGTAGCATTC ATGTAGCCAA TGAAGGTATC CCAACGATTA CAATCGGCGT GCCATTAAGA TATATGCACT CTAATGTATC TGTGCTCAAC ATTGATGATT ATACAAATTC AGTGCGCTTA ATTACTGAGA TTGTTCGATC ATTAAATGAT GACAGTTATC AAGCACTTAT GTGGTAA
|
Protein sequence | MPESKALLKS LTDVNGISGH EMQVKSLMKD YLTPVSDDIV EDQLGGIFGK KNATHGTKSL MISGHLDEIG FIVTQIDEQG YIYFTPIGGW WNQVMLSQKV TITTESGKEI RGIIGSKPPH ALSSEERKKP VDIKNMYIDI GVRNKEEAKE AGIELGNMIT PYSEFESLAN DKYLTAKAFD NRYGCALAVE VLQQLKDENI DINLYAGATV QEEVGLRGAK VAANLIKPDL AIAVDVGVAY DVPGMTSEKN EGKLGDGPLA ILMDATSIAH DGLRKHIKDV AEHHNIPVQW ATTPGGGTDA GSIHVANEGI PTITIGVPLR YMHSNVSVLN IDDYTNSVRL ITEIVRSLND DSYQALMW
|
| |