Gene SERP2040 details

Gene Information

• Locus tag: SERP2040
• ID: 3242549
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Staphylococcus epidermidis RP62A
• Kingdom: Bacteria
• Replicon accession: NC_002976
• Strand: -
• Start bp: 2060849
• End bp: 2061631
• Gene Length: 783 bp
• Protein Length: 260 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 637168726
• Product: abortive infection family protein
• Protein accession: YP_189596
• Protein GI: 57865426

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATATTA AACAATCTTC AGAGAAACAA GGTCGACCGC ATCATTTATC AGACAGTAGG 
ACAGTTTTAA AAAGAAATTT TATATTAATA CCAACTTATA TTTTATTACA AAGTATCATA 
CCAATCATTG TTGTTTTCGG CTCATTAGGC ATCACTGCCA TGATAACACA ACAGGCACCA 
CCACAATGGT TGTATCATTG TTCATTGAGT TTAAGTTTTG TGATTGCTCA AGGTCTAATA 
TTAATTATCT TTTATAAAAT ACATCAATCT GTAATAAATG ATGTGATGAA GCAACAATGG 
ATAATTGCAA AGAATAAAAT AATTAAAATT GTAATAGTTG CGATTGTCGT ATATTTATTA 
TTACTTATAA TTCGGGTGAT TGGAACATCA TTACCTAATC ATTTAAGTTA TCATCTCACT 
CAATCCGAAC AACGTACGCT AGGGCTATTT AAATCACCAT ATGTGTTGTT AGTTACTTTT 
ATATCCATGG TATTCTTACG TCCAATGGTA GAACAAATCA TTTATAGATA TCTCATCATC 
CATGAATTAG GAAAAGTATG GAATAGACAA TTTGTAATTG GTTTGTCTAT TGTTATTGAA 
ACGATCGTAC ATGTTTACGA CATGGCATCG ATTTTTGAAA TTTTTCCATA TATCGTTATT 
GCTTCAGCAG CTACAATACT ATATATTAAA TCGCGGGATA ATTTAATTGT CGCTTATATA 
TTTCAAGTGA TTTTGCAATG TATCCTTTTT ATAGAAATTT TATGTAAGTA TACCAACTTT 
TAA 

 

Protein sequence

MDIKQSSEKQ GRPHHLSDSR TVLKRNFILI PTYILLQSII PIIVVFGSLG ITAMITQQAP 
PQWLYHCSLS LSFVIAQGLI LIIFYKIHQS VINDVMKQQW IIAKNKIIKI VIVAIVVYLL 
LLIIRVIGTS LPNHLSYHLT QSEQRTLGLF KSPYVLLVTF ISMVFLRPMV EQIIYRYLII 
HELGKVWNRQ FVIGLSIVIE TIVHVYDMAS IFEIFPYIVI ASAATILYIK SRDNLIVAYI 
FQVILQCILF IEILCKYTNF