Gene SERP2021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP2021 
Symbol 
ID3242576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp2040235 
End bp2041071 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content33% 
IMG OID637168707 
Producthypothetical protein 
Protein accessionYP_189577 
Protein GI57865393 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0706] Preprotein translocase subunit YidC 
TIGRFAM ID[TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0148683 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATAAAC GACTTTTCAT CACTTTATTA GGTTTTATCA TTTTACTAGC TGGATGCGAT 
TATTCTAAAG AAGAGAACCA AACTGGTATA TTTTATAACG TTTTTGTAAA ATCTATGGAT
GGATTTCTTC ATTTTCTTGG CAGAGTCTTT CAGGATAACT ATGGCTTTGC TATTATTTCT
ATTGTACTCA TAGTTCGTTT CATCCTATTA CCTTTCATGT TAATACAAGT TAAGAATATG
CATATGATGC GCGAAAAAAC AAAAGTCGTC CAACCAGAAT TGGATGCTAT AAGAGATAAA
ATGAAACACG CAACATCACA AGAAGAACGT AATGCAGCCA ATCAATTGCT TATGAAAAAG
TATCAATCGT ATGGAATTAA TCCATTAAAA AATATGTTAG GGTGTCTTCC TGTTCTTATA
CAAATGCCTA TATTAATGGG GCTTTATATG AGTTTGAAGT ACCCTTCGAG TCACGGAATT
ACTGAATACC CACATTTCTT ATGGTTTGAT TTAACGCAAC CTGATTTGAT TATGACAATA
ATCGCAGCAA TCATGTATTT TGTTCAGCCA CTTGTAAACT CAATCCATTA TCCAAAAGAT
CAAAGAAAAA CATATTACTT TATGATGGTA TTTTCACCGA TATTCATAAC ATATGCGTCT
CTACATTCTG CTGCAGCTTT GGGCTTATAT TGGAGTATAA GCGCTGCTTT TCTAATAGTG
CAAATGCATT TTGCTCACTC TCATTATAAG AAAGTGGCAC TACATGAAGC TAAAAAACTC
AAACAAAAAT TAGAGCAAAA TAAAGACAAT AGTGAGTTAT TAACCGAAGA GTCATAA
 
Protein sequence
MHKRLFITLL GFIILLAGCD YSKEENQTGI FYNVFVKSMD GFLHFLGRVF QDNYGFAIIS 
IVLIVRFILL PFMLIQVKNM HMMREKTKVV QPELDAIRDK MKHATSQEER NAANQLLMKK
YQSYGINPLK NMLGCLPVLI QMPILMGLYM SLKYPSSHGI TEYPHFLWFD LTQPDLIMTI
IAAIMYFVQP LVNSIHYPKD QRKTYYFMMV FSPIFITYAS LHSAAALGLY WSISAAFLIV
QMHFAHSHYK KVALHEAKKL KQKLEQNKDN SELLTEES